Salicibibacter cibarius: HUG15_08630
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Entry
HUG15_08630 CDS
T07370
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
scia
Salicibibacter cibarius
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scia03019
]
HUG15_08630 (yhaM)
Messenger RNA biogenesis [BR:
scia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HUG15_08630 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QQK75622
UniProt:
A0A7T6Z2G0
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All DBs
Position
1638820..1639761
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AA seq
313 aa
AA seq
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MEKGIYYATAGDKIDRQLLIRQATRGIASNGKPFLTLRLSDKSGDIEAKLWGVKPEDERT
YTGKTIVSIQGEVFDYRGRLQLKIARIRPVNDQDQVKMEDLVPTAPMEKLDMLERVNQFI
FDIGNAKIQRITRSLLKKYQHGFLDAPAATRNHHEFMSGLAYHVVCMLQIAQSIVQMYPS
LNKDLLYAGIILHDLGKVRELSGPIDTEYTTEGKLIGHISLMAAEIRQAASELNIEGEEP
ILLEHLILSHHGKGEWGSPKPPLLREAEILHYIDNLDAKMNMMDRALGKTEAGHFTERIP
ALENRTFYKPKNI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggaatttattacgcgacagccggcgataaaattgatcgccagttgctcatt
cgtcaagcgacgcggggaatagccagtaacggcaagccgtttttaacgttgcggttatcg
gataagagcggtgatattgaggcgaaattatggggcgtcaaaccggaagacgaacgcaca
tataccggaaaaacaatagtgtctatccaaggggaagtcttcgattaccgcgggcgtttg
cagttaaaaattgcccggatacgaccggtgaatgatcaagatcaagtgaaaatggaagat
cttgttccgacggcccctatggaaaaactggatatgcttgaacgcgtcaaccagtttatt
tttgatatcggaaacgctaaaatccaacgaatcacacgttccttgcttaaaaaataccaa
catgggtttttggatgcaccggcagcaacgagaaatcaccatgagtttatgtccggactt
gcctatcacgtcgtatgtatgcttcagatcgcccaatcgatcgtgcaaatgtaccccagc
ttgaacaaagatttgctttatgccggaatcatcttacacgatcttggcaaagtgcgagaa
ctgtccggaccgattgacacggagtatacgacggagggaaaattgatcgggcatatctcc
cttatggctgctgaaatccgtcaagcggcatctgagttgaacattgaaggggaagagccg
atattgctggaacacctcattctaagccaccatgggaagggagaatggggaagcccgaaa
cctccgcttttacgggaggcggagattctgcactatatcgataaccttgatgcaaagatg
aatatgatggatcgggcattggggaaaaccgaagcgggtcatttcacggaacgtatcccc
gctttggaaaatcgaacattttacaagccgaaaaatatttaa
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