Salicibibacter cibarius: HUG15_08845
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Entry
HUG15_08845 CDS
T07370
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
scia
Salicibibacter cibarius
Pathway
scia03410
Base excision repair
scia03430
Mismatch repair
scia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUG15_08845 (recJ)
03430 Mismatch repair
HUG15_08845 (recJ)
03440 Homologous recombination
HUG15_08845 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scia03400
]
HUG15_08845 (recJ)
DNA repair and recombination proteins [BR:
scia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HUG15_08845 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HUG15_08845 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HUG15_08845 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
QQK75662
UniProt:
A0A7T7CB79
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All DBs
Position
1681552..1683894
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AA seq
780 aa
AA seq
DB search
MLDAKTRWKVRPLDTRAKALAGALRVSERTAHLLCRRGMEHVEDAHVFLHTDESILHDPF
ALAGMEDAVSRIKRAVNDDEKIVVFGDYDVDGVSSTALMCETLEKMGASYDWYVPNRFTE
GYGPNSAAFQKLQDEGCTLVITVDTGIAAAETINAAQKNGLDVIVTDHHEAPPELPDALA
IINPKQMDCPYPFKELAGVGVVSKLAHALLDVFPEDGLDLIALGTISDLVELVDENRFFA
KAGLPKLDKLNRSGLQALKEISGIKGPPFSEETVGFGFGPRLNAAGRMDSAAPAVQLLLT
SDPGEAQSLAEVIDGYNRERQQTVEKITEEALAQLQAKGEDLPAIVVAGKGWNSGVTGIV
ASRLVEKYYRPTIVIALDDEGSGKGSARSIEGFDLYQSLSKHVHLFSRFGGHRMAAGLSI
DEDKIPDLRATLEKEVNGTLPPESFVPTTDIELTLSVEEVTTELIREIEELAPFGVGNPK
PLVQIENIPIQQKRKIGSMQNHLKMSVGDAGPLDCVGFRLGHLHDRIQNDANIHLAGELS
VNEWKGNEKPQIILRDVAVKERQVFDVRGGKDLQSLTSISDGLTIIIFQKDHAKDAREQG
FSSTNFLFPDEESLTVPTDILFLDLPEHLSDLTRFLNENESFIRSIYTGFMEKGQAFFTA
KPTREAFKWLYVYVKKYAPLHLREHEPVIAKYQGWSTDTIHFMLQVFTELEFVTLSGGKL
VVNEHPLKQDLQASSTYRSYEEKREIEETLKYSTYQALKAFLFACMPDEKKQTEVLTDGL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgttagacgcaaaaacgaggtggaaggttcggccattggacacacgggccaaggcactg
gcaggtgcacttcgcgtctctgaacgtaccgctcatcttctgtgccgtcgggggatggag
cacgtagaggatgcgcatgtttttttacatacagatgaatcgattcttcatgatcctttt
gcattggcgggcatggaggatgctgtcagccgtatcaaacgcgcggtgaatgatgacgaa
aaaatcgtcgttttcggggactatgatgtggacggggtatccagcacggcgcttatgtgt
gaaacacttgaaaaaatgggcgcaagctatgattggtacgtgcccaatcgctttaccgaa
gggtatggtcccaatagcgcagcatttcaaaaattacaggatgagggctgtacgctcgtg
atcacggtcgatacgggaattgcggctgcggaaacgatcaacgccgcccagaaaaacggt
ctggatgtcattgttacggaccatcacgaggcgcctccggaactccccgacgcattagcg
attattaatccgaaacaaatggattgtccgtatcctttcaaggaactggcaggcgtcggc
gtcgtgagcaaacttgcccatgctttgctcgatgtttttcccgaggatggacttgatctt
atcgcgctagggacgattagcgatctcgttgaactcgtggatgaaaaccgtttcttcgcc
aaagccggattaccgaaattagataagctcaaccgttcgggtttacaagcattaaaagaa
atatccgggatcaaaggccctcctttttcggaagaaacggtaggttttgggtttgggccg
cgactcaatgccgccggacgaatggattcggcggccccggcggtacaattgctgttaact
tccgatcctggcgaggcacagtccttggcagaagtgattgacggatacaaccgtgaacgg
caacaaacggtggaaaaaatcacggaggaagcactcgcccaattgcaggcaaagggagaa
gatctccctgcaatcgttgtggccgggaaaggctggaactccggggtgaccgggatcgtt
gcctcgagacttgttgaaaagtattatcggccgacgattgtgatcgcccttgacgatgaa
ggaagcggcaaaggatccgcccgcagcattgaagggtttgatctctatcagtcactttcc
aaacatgtccatcttttcagccgttttggcggacaccggatggcggcgggattatccatc
gatgaagataagattcccgaccttcgggcgacccttgaaaaagaagtgaatggtacattg
cctccggaaagcttcgtgccaacgaccgatattgaattaacgctttccgtcgaggaagtc
acgacagagctgattcgggaaatcgaagaactggcgccatttggcgttggaaaccccaaa
ccgttggtgcagatcgagaatattccgattcaacaaaaacgaaaaatcggaagcatgcaa
aatcacttaaagatgtcggtaggggatgcgggccccctcgattgtgtcggcttccgctta
ggccaccttcatgatcggattcagaacgacgcaaatatccatttggccggtgaattgtcc
gtgaatgaatggaaagggaatgaaaagccacaaatcattcttcgagacgtcgctgtcaaa
gagcgacaagttttcgatgttcgcggagggaaagatttacaatcgcttactagcatatct
gacgggcttactattattatttttcagaaagaccatgcaaaagacgcgcgtgagcaaggc
ttttcatcgaccaactttttatttcccgatgaagaaagcttaacagtgccaacggatatc
ttatttctggatctaccggaacacttatccgacttaacgcgatttctaaatgaaaacgaa
tcgttcattcgttcgatctacacaggatttatggaaaagggtcaggctttttttacagca
aaaccaacacgcgaggcttttaaatggttgtatgtttatgtgaaaaaatacgcccctctt
catctccgggaacacgagccggtcattgcaaagtaccaaggctggtcaacagatacgatt
cactttatgctgcaagtgtttacggaacttgaattcgtgacactgagcggaggaaaactg
gttgtaaacgaacatccgttaaaacaagatttacaagcatcgtcgacgtatcggtcctat
gaagaaaaacgggaaattgaagaaacgctgaagtattccacctatcaagcgttaaaagct
tttttatttgcctgcatgccagatgaaaagaaacaaacagaggtgctgaccgatggatta
taa
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