Salicibibacter cibarius: HUG15_08920
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Entry
HUG15_08920 CDS
T07370
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scia
Salicibibacter cibarius
Pathway
scia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUG15_08920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scia03400
]
HUG15_08920
Enzymes [BR:
scia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HUG15_08920
DNA repair and recombination proteins [BR:
scia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUG15_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
Helicase_RecD
UvrD_C
HHH_5
AAA_16
AAA_28
SLFN-g3_helicase
AAA
DEAD
AAA_12
AAA_18
nSTAND3
NACHT
NTPase_1
T2SSE
NPHP3_N
AAA_17
cobW
PIF1
Herpes_Helicase
Zeta_toxin
RecR_HhH
AAA_5
AAA_23
AAA_29
KTI12
TniB
TsaE
ABC_tran
AAA_15
Mg_chelatase
Ribosomal_S10
Motif
Other DBs
NCBI-ProteinID:
QQK75675
UniProt:
A0A7T6Z2A0
LinkDB
All DBs
Position
1698687..1700966
Genome browser
AA seq
759 aa
AA seq
DB search
MNEEWKSSKDKITGTVSHVIFRNEKNGYTVLNIHVDDATPAIEASSISVVGHFPFPPEED
LLTFYGQFHEHERYGQQFHMELYEPYIPEGKPAVIQYLSSERFPGIGKKTASRVVAELGE
SAIDKILHQPNLLYDIPDIKRQQADVLTERLMEEQEVAGVMSRLITYGFGTELATKIIQA
YKGETLNVVEKDPYQLVQDIEGIGFQKADALGAQLGIESTSKKRLKAGLLFSLWQMSQSI
GHVYLPVDVWTEEALKVLNYRNHDVDAEMLNQEVIELDEEGTVAVPDERAYILSLFFAEK
GLATNVNRLLETDVQETFAEDLYLKTLGELENDFKITYADRQKEAVELALKSPLMILTGG
PGTGKTTVIRAIVEMFKRMRGWNQRKEKKLPVLLAAPTGRAAKRMAEATGLKAFTIHKWL
GWRGEEEEFLEHDEENPLEGELLIIDEASMIDLWLANQLFKAIPAGMQVIIVGDEDQLPS
VGPGQVLGDLLRSETIPSISLSAVYRQAEGSSIIDLAHDLKEGQLSADLKETKPDRSFIA
CHGTRMPDVILQICQKAMEKGYSAREIQVLAPMYKGTAGIHLLNEKLQALFNPPKQGKRS
MTYGDVVFRNGDIVLQLVNNPEDNVFNGDRGEIIALLKEKETEDGKEKLVVTFDGIEVYY
EKQDLKQITLAYCSSIHKAQGSEFPIVIVPLSMSYRRMLKRNLLYTAITRARDSLIMVGE
QRAFSLAVETNDQHSRYSHLHQRIQEASTNHENVKEGQY
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggaatggaagtcatcgaaggataaaattaccggaacggttagccatgtcatt
tttcggaatgagaaaaatggttatacggttttgaacatccacgtcgatgatgcaacgcct
gccattgaagcctcctccatttctgtcgtcggccatttcccctttcctcccgaagaagat
ctattgacgttttacgggcaatttcacgagcatgaacgttatggccaacagttccacatg
gaactatacgaaccttatatccccgaaggcaagccggcggtgatccagtatttatccagt
gagcgatttccgggaatcggaaagaaaaccgcctctcgtgtcgttgctgaattaggcgaa
tcggcgattgataaaatcctccaccaacctaaccttttgtatgacattcccgacattaag
cgtcaacaagcggatgtgctcaccgagcgattaatggaagaacaggaagtcgccggtgtg
atgagccgcttgattacatatggtttcgggacggaattggccacaaagatcattcaggct
tataagggggagacgttaaacgttgtggaaaaagacccttatcaactcgttcaagacata
gaaggcatcggttttcaaaaagccgatgcacttggcgctcaattagggattgaatcgacg
tcgaagaaacggttgaaagcaggactgttattttcgctgtggcaaatgtcgcaaagcatc
ggacacgtctatttgccggtggacgtatggaccgaagaggctttgaaagtgctgaattat
cgaaatcatgacgtcgatgccgagatgttaaatcaggaggttatcgaacttgacgaggaa
gggacggtcgccgttcctgacgaacgtgcttacatattgtcactcttttttgctgaaaag
gggttagcaacgaacgtgaaccgtttgcttgagacagacgttcaggaaacctttgctgaa
gacttgtatttaaaaacgttgggcgaattggaaaatgatttcaaaatcacttacgctgat
cggcaaaaagaagcggtcgagcttgccctaaagtctccgctcatgattttaaccggtggc
cccggaacgggaaaaacaaccgttattcgcgcaattgtggagatgttcaaacgcatgcgc
ggctggaaccagcgaaaagaaaaaaagctcccggttctgcttgccgcgcccacagggaga
gccgcgaaacgaatggcagaggcaaccggtttgaaggcctttaccattcataaatggctc
ggctggcgcggcgaagaagaggaatttcttgagcacgatgaagagaacccactcgaaggg
gaactgttgatcatcgatgaagcctcaatgatcgatctatggcttgccaatcaactattc
aaggcgataccggccgggatgcaagtgattatcgtcggtgacgaagatcaattgccatcc
gtaggcccggggcaagtgctcggggatttgcttcgatcggaaacaattccgtcgatatcg
ttgtcggcggtttaccgtcaagccgaaggctcatcgatcattgatttagcgcatgattta
aaagaaggtcagttatccgctgatttaaaagaaacgaaaccggatcgatcgttcattgca
tgtcacggaacgcgcatgcctgacgttattctgcaaatatgccaaaaagcgatggaaaaa
ggctattccgcgcgtgaaattcaagtgctcgccccgatgtataaagggacggccggcata
catttgctgaatgaaaaactgcaagccctctttaatccaccgaaacaagggaagcgatcc
atgacgtatggcgatgtcgtctttcgcaatggcgatatcgtcttgcagctcgtcaataat
cccgaggacaatgtttttaacggagaccgcggcgaaatcatcgctcttttaaaagaaaaa
gaaactgaagatggcaaagaaaaactcgtcgttacgtttgacggcattgaagtttactat
gaaaaacaagacttaaaacaaatcacactcgcgtattgttcctcgattcataaagcccaa
gggagcgaattcccgatcgtgatcgtcccattatccatgtcctatcgccggatgttgaaa
aggaacttgctttatacagcaataacgagagcgcgtgattcattaatcatggtcggcgaa
cagcgggcattttcattggctgtggaaacgaatgatcaacacagtcgatattcccatttg
caccagcgcatacaggaagcaagtaccaatcatgaaaacgtcaaggaaggacaatactaa
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