Salicibibacter cibarius: HUG15_09950
Help
Entry
HUG15_09950 CDS
T07370
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
scia
Salicibibacter cibarius
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scia03019
]
HUG15_09950
03009 Ribosome biogenesis [BR:
scia03009
]
HUG15_09950
Enzymes [BR:
scia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUG15_09950
Messenger RNA biogenesis [BR:
scia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUG15_09950
Ribosome biogenesis [BR:
scia03009
]
Prokaryotic type
rRNA helicases
HUG15_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QQK75859
UniProt:
A0A7T7CBI6
LinkDB
All DBs
Position
1912813..1914048
Genome browser
AA seq
411 aa
AA seq
DB search
MSRFSHLEIDARLIKHLQAEEIDRPTEIQERLIPAILRGKDVIGQSQTGTGKTLAFALPI
LSGIHPDDHYVQAVVTAPTRELAEQLYRVFNKCKKDSGMEDIRIRRVIGGTDKERNVADL
QQPPHVVIATPGRLHDLVIKENVLDVHRVRTLVVDEADQMMEMGFLEALDQAIARMPEAL
QMLVFSASIPQRLQPFLKKYMNQPRHVHVKPEQPSPKNLTHYLIPLRSRGRQQLVVEMAA
LLRPYLCLIFVNTKKEAEEVTDLFIAHGLQTECMHGDLSPRARKRSMRNIERAAVPYVVC
TDIAARGMDIKGVSHIINMQLPRDLQYFLHRAGRTARAGASGEVFTIVSKEDYPALHQLQ
KQRFTFQYLDIKKGEWQEIDQLGSGYAPGSQRSKSRKKQRDTPQKKRRKRK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggtttagccacctggaaattgatgcacgtttaatcaaacatttgcaagccgaa
gaaattgaccggccgacggaaattcaagaacggctgattcctgctatattaaggggaaaa
gatgtgatcggccagtcgcaaacgggcaccgggaagacacttgcgtttgccttgcccata
ttgtcggggattcaccctgatgaccattatgtgcaagccgtggtgactgccccgacgaga
gaattggccgaacagctttaccgggtttttaataaatgcaaaaaagacagcggcatggaa
gacattcgtatccggcgagtcattggcggaacggataaagaacggaacgtggctgacctt
caacaaccgccgcacgttgtcattgcaacgccggggaggttacacgatcttgtgataaag
gaaaacgtccttgatgttcatcgcgtacggacgcttgtcgttgatgaagcagaccaaatg
atggaaatgggtttcttggaagcgttggatcaagcgatcgcccgtatgccggaagcgttg
caaatgctcgtcttttccgccagcatcccgcaacgccttcagccctttttaaaaaaatac
atgaatcaaccgcgccatgtgcacgtgaaaccggaacaaccttccccgaaaaacctaacc
cattatctgatcccgttacgaagtcgcgggcgccaacaattggtagtggaaatggccgct
ctcttacgtccgtatctatgcttgatttttgtcaatacgaaaaaagaagcggaagaagta
acggatctatttattgcgcacggactccaaaccgagtgcatgcatggcgacctttcccct
cgtgcccgtaaacgatcgatgcggaatattgaacgcgcggctgtgccttatgtggtttgt
accgatattgccgcccgcgggatggacattaaaggggtttctcacattattaatatgcaa
ctgccgcgggatttgcaatactttttgcatcgggcagggcggacggcgcgagcgggggct
tccggcgaagttttcacgattgtttccaaagaagactacccggcgttgcatcaattgcaa
aaacaaaggttcacctttcagtatttggatattaaaaaaggggaatggcaagaaattgat
caattgggcagtggttatgcaccgggaagccaacgttcaaagtcccggaaaaagcaaagg
gatacgccccaaaaaaagaggaggaaaagaaaatga
DBGET
integrated database retrieval system
