Salicibibacter cibarius: HUG15_12860
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Entry
HUG15_12860 CDS
T07370
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
scia
Salicibibacter cibarius
Pathway
scia02020
Two-component system
scia02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HUG15_12860
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HUG15_12860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scia03021
]
HUG15_12860
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scia02035
]
HUG15_12860
Transcription machinery [BR:
scia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUG15_12860
Bacterial motility proteins [BR:
scia02035
]
Flagellar system
Flagellar assembly proteins
Stator
HUG15_12860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
SieB
Motif
Other DBs
NCBI-ProteinID:
QQK76360
UniProt:
A0A7T6Z3T8
LinkDB
All DBs
Position
complement(2494070..2494837)
Genome browser
AA seq
255 aa
AA seq
DB search
MERPTAMDDHWARWINEKDEQAAEEIMAAHSPLVDYHVQRIGATLPTNVDREDLRSQGMI
GLYDALLKFDHRRDLKFYTYASFRVRGAIIDSLRKEDWLPRSSREKAKRIEDTTEWLEQQ
KGRHVTEYEVANTLQLSIDDVLKTTAENYMAQLLSIDQAPEDEDREDGHPFMLQDHQTPT
PHEEAEKNETKKQLQHLISTLSEKEKLVLSLFYQEDLTLTEIGHTLRLSTSRISQLHAKA
LFRLKQAFQKEEAKI
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggaacgaccaaccgcaatggatgatcattgggcccgttggatcaatgaaaaagatgaa
caggcagccgaagaaattatggctgcccactctccgctcgtcgattaccatgtgcagcga
atcggcgctacgcttccgacaaatgtcgaccgtgaggatttgcggtcgcaaggcatgatt
ggcttatacgatgcgttgttaaaattcgatcatcgacgtgatttgaaattttatacatat
gcgtcctttcgcgtacgcggggctatcattgacagtttgcggaaagaggattggctgcct
cgctcttcgcgggaaaaggcaaaaaggattgaagatacgacggaatggcttgaacagcaa
aaaggccggcatgtcacggaatatgaagttgcgaacacgcttcagctatccatcgatgat
gttttaaaaacgacggccgaaaattacatggcacagctattatcgatcgatcaagcgccg
gaggacgaggaccgggaagatggtcatccgttcatgttgcaagatcatcaaacgcccact
cctcatgaagaggcagaaaagaatgagacaaagaaacagttgcaacatctgatatcgacg
ctttcggagaaagaaaaactcgtgctctcccttttttaccaagaagatctgaccttgacg
gaaatcggccatacattgcggttgtccacttcaaggatttcccaacttcatgcaaaggcg
ttgtttcgtttaaaacaggcatttcaaaaagaagaagcaaaaatataa
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