Salicibibacter cibarius: HUG15_13010
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Entry
HUG15_13010 CDS
T07370
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scia
Salicibibacter cibarius
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scia03032
]
HUG15_13010 (topA)
03400 DNA repair and recombination proteins [BR:
scia03400
]
HUG15_13010 (topA)
Enzymes [BR:
scia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HUG15_13010 (topA)
DNA replication proteins [BR:
scia03032
]
Prokaryotic type
DNA Topoisomerases
HUG15_13010 (topA)
DNA repair and recombination proteins [BR:
scia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUG15_13010 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QQK76388
UniProt:
A0A7T6Z413
LinkDB
All DBs
Position
complement(2519769..2521841)
Genome browser
AA seq
690 aa
AA seq
DB search
MADYLVIVESPAKAKTIGKYLGKKYTVKASMGHVRDLPKSQMGVDVDQQYNPKYITIRGK
GPVLQELKQAAKKAKKVYLAADPDREGEAIAWHLAFSLGIDEGTPCRVVFNEITKPAIQE
AFKNPRTINTDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSIAVKMINDREK
EIQQFEPEEYWNIKGTFSYEKETFEAQFHGKGNKKEALKTKEDVDEVLGNIKGDDFTIAS
VQKKERRRNPVQPFITSSLQQEAARKLNFRAKKTMMIAQQLYEGIELGKEGTVGLITYMR
TDSTRISDTAKEEARTYIQEKYGQQYVGGDRKPKKQGENTQDAHEAIRPTIVSREPKSVK
DHLSRDQLRLYRLIWERLVASRMAPAIMDTMTADLENGGMIFRATGSKIKFQGFMKVYVE
GSDDRKKEENKLLPALEEGQTAQKESLEPTQHFTQPPPRYTEARLVRTMEELGIGRPSTF
APTLDTIQRRGYVSLQDRRFVPTELGEIVLDLIVEFFPEILNVKFTAQMESDLDDVEEGK
ENWIEIIDTFYQGFEKRLKVADREMEEVEIKDEPVGEDCEKCGHPMVYKMGRYGRFMACS
NFPDCRNTKAILKPIGVKCPRCKEGNVVERKSKKQRTFYGCDRYPACEFVSWDKPIARPC
PKCQSLLVEKKAKKTVRVQCSNCDYREEPN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcagattaccttgtaatcgttgaatctcccgctaaagcaaaaacaataggaaagtat
ttagggaaaaaatatacggtgaaagcatcgatgggacacgtgcgtgatttgccgaaatca
caaatgggcgtggatgtggatcagcaatataacccgaagtacattacgattcgcgggaaa
ggcccggttttacaagaattgaaacaagcagcaaaaaaagcaaaaaaagtctaccttgcc
gcggaccccgaccgtgaaggggaagcgattgcgtggcatttggcattcagcttggggatt
gatgaagggacgccttgccgggttgtgtttaatgaaatcacaaaacctgcgattcaggaa
gcattcaaaaacccgcgcactattaataccgatctcgttgatgcccagcaggcacgtcga
attttggaccggctcgttggttacaacatcagtccgttgctttggaaaaaagtgaaaaag
ggtttaagcgcaggacgtgtacaatcgatcgccgtaaaaatgattaatgaccgggagaaa
gaaattcaacagtttgaacctgaagaatactggaacataaaaggaacattttcatatgaa
aaagaaacattcgaagcccaatttcatggaaaagggaataaaaaagaggctttgaagaca
aaagaagatgtggacgaagtccttggcaacataaaaggggacgattttacgattgcttcc
gttcagaaaaaagaacggcgacgcaatccggtacagcctttcatcacctcttcgctccag
caggaagcggcccgaaagcttaatttccgggcaaaaaagacgatgatgattgcccagcaa
ttgtacgaaggaatagagctgggcaaagagggcactgtcggtttaattacgtatatgcgt
accgattccacacgaatttccgatacggcaaaagaagaagcgcggacctacattcaagaa
aaatacggacagcaatatgtaggcggcgaccgcaagccaaagaaacagggagagaacacg
caagacgcccacgaagccatccgtccaacgattgtctcccgtgaacccaaatcagtcaaa
gatcacttgagccgggatcaattaaggctctatcgtctaatttgggaacgtctggtggcg
agtcgtatggcaccagcgatcatggatacgatgacggcagatttggaaaatggcggaatg
atctttcgggcaacgggatctaaaataaaatttcaagggttcatgaaagtttatgtggaa
ggaagcgacgatcgcaaaaaggaagaaaacaaacttcttcccgcgctcgaagaagggcaa
acggcacaaaaagaatcgctggagccgacgcaacattttacgcaaccaccgcccagatac
acggaagcacgactcgtgcgcacgatggaagaactgggcatcggccgtccttccacgttt
gcgccaacgcttgacactattcagcggcgcgggtatgtctcattgcaggaccgtcgtttc
gtgccgacggaacttggagagattgttcttgatctcatcgtcgagtttttccccgaaatc
ttaaacgtgaaatttaccgcccaaatggaatcggatcttgacgacgttgaggaaggaaaa
gaaaactggatcgagatcatcgacaccttctaccaagggtttgagaaacggttaaaagta
gccgatcgggaaatggaagaagttgagatcaaagacgagccggtaggggaagactgtgaa
aaatgcgggcatcccatggtttacaaaatgggaaggtatggaaggtttatggcttgctcc
aattttcccgattgccggaatacaaaggccattctaaagccgatcggcgtaaaatgtccc
cggtgtaaagaagggaacgtcgtagaacgaaaaagtaaaaaacagcggacattttatgga
tgcgatcgctacccggcgtgtgagttcgtgtcttgggataagccgattgcacggccgtgc
ccgaagtgccaaagcttactcgtcgagaaaaaagccaaaaaaacggtgcgggtacagtgt
tcgaattgcgattatcgtgaagagcccaattag
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