Salicibibacter cibarius: HUG15_13235
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Entry
HUG15_13235 CDS
T07370
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scia
Salicibibacter cibarius
Pathway
scia00061
Fatty acid biosynthesis
scia00071
Fatty acid degradation
scia01100
Metabolic pathways
scia01212
Fatty acid metabolism
scia02024
Quorum sensing
scia04146
Peroxisome
Module
scia_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HUG15_13235
00071 Fatty acid degradation
HUG15_13235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HUG15_13235
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUG15_13235
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scia01004
]
HUG15_13235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scia04147
]
HUG15_13235
Enzymes [BR:
scia01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HUG15_13235
Lipid biosynthesis proteins [BR:
scia01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HUG15_13235
Exosome [BR:
scia04147
]
Exosomal proteins
Exosomal proteins of breast milk
HUG15_13235
Exosomal proteins of breast cancer cells
HUG15_13235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QQK76430
UniProt:
A0A7T7CC14
LinkDB
All DBs
Position
complement(2577672..2579381)
Genome browser
AA seq
569 aa
AA seq
DB search
MNKPWYSNWPKGLPKSMDFPELPVHSILKGSANRFPDQVALTFKDQNWTFAEIYDQTLRF
AHALHTLGIRKGDVVSIHMPNCPQYMIAYYGIMMNGAIFSPVNPMLTGRELSHQLKDCEA
RAIVTHETAADTLRKVLPETVIDIVVLTGEKDDETEEWPDDWYRLSALLSNYEPKCPEVD
IEPKRDLAHIAYTGGTTGRSKGVMITHYKAVCNIIQSCCWSSGLLHDVEDGGLIVNSASE
ISKEEFPVPVGTGTVLNISPWYHAMGTLGYMNNLILQGARIVLHTRFQPEDYLDAIEQYG
ITTIGGSAPMFSALVNAESINDRDLTSVRQVRSGAAPISKKVLQRLHELFPNAIISEGYG
LTEASMMHTSNPGNKSGLRKLGSVGMPVFDTDIKIVADDSDEPLPIGCSGEVCAKGPQIM
KGYYKKPEETKEVLKDGWLRTGDIGQLDEDGYLYIVDRKKDMLIHKGYNVYPRELEELLM
QHSLVANAAVVGVPHEESVEIPIAFVILKSKPDSLDIVSTKERIMTDINKQVVPYKKIRD
VYIEEELPITGAGKILKRALKEKAAQSHR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccatggtatagcaattggccgaaagggcttccaaaaagcatggattttcct
gaattgcccgtgcactctattttaaaagggtctgcgaaccgttttccggatcaagtcgcg
ctaacttttaaggatcaaaattggacatttgcagagatatatgatcaaactttacggttt
gcccatgctttgcatacgttaggaatccgcaaaggggatgtcgtatccattcatatgccg
aattgtcctcaatatatgatcgcatattacggtataatgatgaatggggctattttctct
ccggtcaatccgatgctcacggggcgtgaattaagtcatcaattaaaagattgtgaagcg
cgggctatagtgacacacgagacagctgcagatacattgaggaaagttttaccggagacc
gtgatagacatagttgtcttaacaggtgaaaaggatgatgagactgaagaatggccggat
gattggtatcggttatcagctttgctatcaaactatgaacctaaatgtccggaggtggat
atcgaacctaaacgggatttggcgcatatcgcctatacaggcgggacgacggggcgatcc
aaaggtgtgatgatcacccactataaggcggtgtgtaacatcattcaatcatgctgttgg
tcgagtgggctcttgcatgacgtggaagatggcgggcttatcgttaattctgcgtccgaa
atttctaaagaggaatttccggtaccggtaggcaccgggacagtcttgaacatttcccct
tggtatcacgcgatggggacgttaggttacatgaataatttaattttgcaaggagccaga
attgtattgcacacgcgtttccaacccgaagattatttagatgccatcgaacagtatgga
ataacaacgattggcggatcagcgccgatgtttagtgcccttgtcaatgctgagagcatt
aatgatcgcgaccttacttccgttcgtcaagttcgttccggtgcagcccccatttctaaa
aaagtgttacagcgcttacatgaactgtttccaaacgcgattatatcagaaggctacggc
ttaaccgaagcttcgatgatgcacacctcaaacccggggaacaagtcggggctccgaaaa
ttaggctccgttggcatgccggtttttgataccgatatcaaaatcgtagcggatgattcc
gatgagcctcttcctatcgggtgttccggggaggtttgtgccaaaggcccccaaatcatg
aaaggttactataaaaagcctgaagaaaccaaagaagtgttaaaggatggttggttaaga
acaggcgatatcggacagttggatgaagatggctatctctatatcgttgatcgcaagaaa
gatatgctcattcacaaaggatacaacgtttatccgagggagctggaagaactattgatg
caacattcattggtagccaatgccgctgttgttggagtccctcatgaggaaagtgttgaa
attccaatcgctttcgttatattaaaatcgaagcctgattcattggatattgtgtcaacc
aaagaacgaatcatgactgatataaataaacaagtcgttccttataaaaaaattcgagac
gtatatatcgaagaagagcttccgattaccggtgcaggcaaaattttaaaacgagcttta
aaagaaaaagcagcacaaagccatcgttaa
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