Salicibibacter cibarius: HUG15_17490
Help
Entry
HUG15_17490 CDS
T07370
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
scia
Salicibibacter cibarius
Pathway
scia00260
Glycine, serine and threonine metabolism
scia00460
Cyanoamino acid metabolism
scia00630
Glyoxylate and dicarboxylate metabolism
scia00670
One carbon pool by folate
scia00680
Methane metabolism
scia01100
Metabolic pathways
scia01110
Biosynthesis of secondary metabolites
scia01120
Microbial metabolism in diverse environments
scia01200
Carbon metabolism
scia01230
Biosynthesis of amino acids
scia01240
Biosynthesis of cofactors
scia04981
Folate transport and metabolism
Module
scia_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HUG15_17490
09102 Energy metabolism
00680 Methane metabolism
HUG15_17490
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HUG15_17490
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HUG15_17490
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HUG15_17490
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HUG15_17490
Enzymes [BR:
scia01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HUG15_17490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_5
GNVR
Motif
Other DBs
NCBI-ProteinID:
QQK77194
UniProt:
A0A7T7CCR1
LinkDB
All DBs
Position
complement(3455986..3457239)
Genome browser
AA seq
417 aa
AA seq
DB search
MSLKENDATIFSAIEGERDRQHDTLELIASENFVSEDVLEAMGSVMTNKYAEGYPGRRYY
GGCENMDTVENVAIERLKELYQADYANVQPHSGASANLAVYYSQLTPGDKVMGMDLSHGG
HLTHGSPVSISGKWFDVVSYGVREDDHLIDYDQLEDQAKKEKPKLIIAGASAYPRVIDFA
KFKEIADKVDAKLIVDMAHIAGLVAAGVHPSPVPYADVVTSTTHKTLRGPRGGFVLTNDK
EMAKGINKAVFPGLQGGPLMHVIAAKAVSFKESLQPSFKTYANRIVENAVTLGETLKEKG
AALVSGGTDNHLLLVDVRPWNLTGKEAEQLLEKAGITANKNTIPFDPEGPFVTSGIRIGT
AALTTRGMGKQEMINIGEIIADVLGSNGNSDVLEQAKNKTNDICKAFPLFQQEARVT
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaaagaaaacgatgcaactattttttcggcaattgagggagagcgggacaga
cagcatgacacacttgagctaatagcgtcagaaaattttgtgagcgaagatgtcttggaa
gctatgggatcggtgatgacgaacaaatatgcggaaggctatccggggagaaggtattac
ggcggatgtgaaaacatggatactgtcgagaatgtggcgatcgaacgattgaaagaactg
tatcaagccgattatgcgaatgtgcaacctcattccggagcctccgccaacctggctgtt
tattactcacagttaacacccggggataaggtaatggggatggatttatcccatgggggg
catttgacgcacggcagtcctgtcagcatttccggcaagtggtttgatgttgtttcttat
ggcgtaagggaagacgatcacttgattgattacgatcaattggaagatcaggcaaaaaaa
gaaaaaccgaaactcattatcgccggtgcgagtgcttatccgcgggtcattgacttcgca
aaatttaaagaaattgccgataaggttgatgcaaaactgattgtcgatatggcgcatatt
gccggacttgttgcagccggcgttcacccatcgccggtgccttatgcggacgttgtaacg
agtacgacacataaaacattaagagggcctcgcggagggtttgttttaacgaatgacaaa
gagatggcaaaaggaattaacaaggctgttttccccggcctgcaaggcgggccattaatg
catgtgattgccgcaaaagccgtttcctttaaagagtccctccagccgtcattcaaaacg
tatgccaatcggattgtggaaaacgcagtcacactcggagagacgttaaaagagaaaggc
gctgccctcgtttcaggcggaaccgataaccatttattgctcgtcgatgtccgtccatgg
aaccttaccggaaaagaggcagagcaattgctggaaaaagccggcattacggctaataaa
aatacgattccgtttgatccggagggaccgtttgtgacgagcgggattagaattggcaca
gcagcgcttacaacacgggggatgggaaaacaagaaatgattaacattggcgaaattatt
gccgatgtcctgggaagtaacggcaattccgatgtcctggaacaggcgaaaaacaagacg
aatgacatttgcaaagcctttcctcttttccaacaagaagcacgtgttacttga
DBGET
integrated database retrieval system