Salicibibacter cibarius: HUG15_17895
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Entry
HUG15_17895 CDS
T07370
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scia
Salicibibacter cibarius
Pathway
scia03030
DNA replication
scia03410
Base excision repair
scia03420
Nucleotide excision repair
scia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUG15_17895 (polA)
03410 Base excision repair
HUG15_17895 (polA)
03420 Nucleotide excision repair
HUG15_17895 (polA)
03440 Homologous recombination
HUG15_17895 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scia03032
]
HUG15_17895 (polA)
03400 DNA repair and recombination proteins [BR:
scia03400
]
HUG15_17895 (polA)
Enzymes [BR:
scia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUG15_17895 (polA)
DNA replication proteins [BR:
scia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HUG15_17895 (polA)
DNA repair and recombination proteins [BR:
scia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HUG15_17895 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUG15_17895 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
CCDC158
Motif
Other DBs
NCBI-ProteinID:
QQK77263
UniProt:
A0A7T6Z5A8
LinkDB
All DBs
Position
complement(3546460..3549093)
Genome browser
AA seq
877 aa
AA seq
DB search
MNKLVLVDGNSVAYRAFYALPLLSNDKGVYTNAVYGFTTMLLKILEEEQPTHMLIAFDAG
KTTFRHEQFEDYKSDRQKTPPELSEQLPIIQEILQSFTINSVQVELYEADDIIGTLAKRA
EDENWQVRIYTGDKDLLQLVTDRTHVAITKKGITNVDWYDTDAIAERYGIPATHIPDMKG
LGGDSSDNIPGVPKIGEKTALKLLAEYGNIEDVLDHADDVSGPKMRERLKEYREQALMSK
QLAVINREAPVDLGLDRLSYEGYDSKAVRQLFKEYGFNSLMNQIATDEDIEEEEAALEEF
EFQHMENITDEMLASPAALIVEVPVENYHNADIWGVGIVNENGSFTVPAETALTTDAFRD
WLADEKKEKYLFDAKRVIVALGWKNIALKGVPFDALIASYLLDPSLSAHDMADIAERRGL
HTVLADESVYGKGAKFSKPEAATLNDHLARKAATLWKIEGALRSELDENEQSGLFSTLEL
PLSLVLAEMELQGIATDEQQLIDMGEELDERLQSLEQDIHSLAGEMFNINSPKQLGPILF
EKLELPVIKKTKTGYSTAADVLEKLADEHEIIPKLLHYRQVMKLKSTYIEGLLKVIHADT
HKIHTRFNQAITQTGRLSSAEPNLQNIPIRLEEGRKIRKAFVPSEPEWVILAADYSQIEL
RVLAHMSGDEKLKAAFHEGQDIHTQTAMDVFDVGKEEVTDTMRRQAKAVNFGIVYGISDY
GLSQNLGITRKEAQSFIDRYFESYPNVKKYMDEAVLHARDEGYVTTLLKRRRYLPEINDR
NFNRRSFAERTAMNTPIQGTAADIIKKAMVDVADDLKRQGLQSRLLLQVHDELIFEVPPT
EIEQMETLVTETMTGTIALDVPLIVDVAYGETWYEAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactcgtgcttgtagacggaaatagcgtggcataccgtgctttttatgccctg
cccctcttatcgaatgataaaggggtctacacaaacgccgtctatggatttacaacgatg
ctgcttaaaattttggaggaagaacaaccgacgcacatgcttatcgcgtttgatgccggg
aaaacaaccttccgacatgaacaattcgaagactataaaagcgatcgccagaaaacgccg
ccggagctttcggaacaactgccgatcattcaagaaattttacagtcgtttacgattaac
tccgttcaggtcgagttatatgaagcagatgatattatcgggacgcttgccaaacgtgca
gaagacgagaactggcaggttcgcatctacaccggagataaggacttgcttcagctcgtg
accgacaggacgcacgttgcgattacgaaaaagggcattacgaatgttgattggtatgac
accgacgcaatcgctgaacggtatggcataccggccacacacattcctgatatgaaaggg
ctcggcggggattcatcggataatatcccgggcgtccccaaaatcggtgaaaaaacagcc
cttaaattattggctgaatatggcaatattgaagacgttctggaccatgccgatgatgta
tccggtccgaaaatgagggaacggctgaaagaataccgggaacaagcccttatgagcaag
caattggcggtcattaaccgggaagcaccagttgatttggggctggaccgtctttcttat
gaagggtatgacagtaaagcagtgcggcagctttttaaagaatacgggttcaattcttta
atgaaccaaattgcgactgacgaggatatagaagaagaggaagcggcacttgaggaattt
gaattccaacatatggaaaatattacagatgaaatgctcgcgtcaccggcggctcttatt
gtcgaagtgccggtagagaattaccacaatgccgatatttggggcgtcggcattgtaaat
gaaaacggatcattcaccgtccccgcggagaccgcactcacaacggatgcttttcgtgat
tggttagccgatgaaaaaaaagaaaagtacttatttgacgccaagcgcgtcatcgtcgct
ttgggatggaagaatatcgcgctcaaaggcgtgcctttcgatgctctcattgcatcgtat
ctcttggatccttctttatcggcgcacgacatggcggatattgctgaacggcggggctta
cacacggttttagcggatgaaagcgtgtatgggaaaggcgcgaagtttagcaagcctgag
gccgcgacgctcaacgaccatttggctcgtaaagcggctacgctttggaaaatagaggga
gcccttcgttccgagttggatgaaaatgaacaaagcggcttgttttcaacgttggagctt
cccttatcattagtgctcgcggaaatggagctgcaggggatcgcgacagatgaacaacag
ttgattgatatgggtgaggaacttgacgagcgcctgcagtcgctcgaacaagacatccat
tcccttgccggtgaaatgttcaatattaattccccgaaacaattggggccgattcttttt
gagaagcttgaacttccggtcatcaagaaaacgaaaaccgggtattccactgctgccgac
gttctcgaaaagcttgccgatgaacacgaaatcattccgaaacttttgcactaccggcaa
gtgatgaaactcaaatcgacgtatatcgaggggcttcttaaggttattcatgcagatacg
cacaaaatccacacgcgttttaaccaagccatcacgcagacgggccgtttgagttcggct
gaaccgaatttgcaaaacatcccgattcgccttgaagaaggaagaaaaatacgcaaagcc
tttgttccttcagaacccgaatgggtgattttggctgctgattattcacaaattgaattg
cgtgttcttgcccatatgtccggtgatgaaaaattaaaagcggcttttcacgaaggacaa
gatattcatacgcaaacagcaatggatgtgtttgacgttggaaaagaggaagttaccgac
acgatgcgtcgtcaggcgaaagcggtgaatttcggaatcgtctatggcattagcgattat
ggtttatcccaaaatctcgggatcacaagaaaagaagcccaatcgtttattgaccgttat
tttgaaagttatccgaacgtgaagaaatacatggatgaagctgtgctccatgcgcgagat
gaaggttatgttacgactctgttaaagcgccggcgttatctccccgagattaacgaccga
aattttaaccgcagaagtttcgcggaacgaacagcgatgaatacgcccattcaaggaacg
gctgccgacatcattaaaaaagctatggttgatgtagcagatgatttgaagagacaagga
ttgcaaagtcgcctgctgttacaagttcatgacgagctgatttttgaggttccgccaaca
gaaatcgaacaaatggaaacgctcgtcaccgagacaatgacgggaacaattgcccttgat
gtgccgcttatcgttgatgtggcgtatggggaaacttggtacgaagcgaagtga
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