Salicibibacter cibi: HUG20_00035
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Entry
HUG20_00035 CDS
T07369
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
scib
Salicibibacter cibi
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scib03032
]
HUG20_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:
scib03400
]
HUG20_00035 (gyrA)
Enzymes [BR:
scib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HUG20_00035 (gyrA)
DNA replication proteins [BR:
scib03032
]
Prokaryotic type
DNA Topoisomerases
HUG20_00035 (gyrA)
DNA repair and recombination proteins [BR:
scib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUG20_00035 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
QQK78472
UniProt:
A0A7T6Z7W1
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All DBs
Position
6408..8885
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AA seq
825 aa
AA seq
DB search
MADHESNVHEINISQEMQSSFLDYAMSVIVSRALPDVRDGMKPVHRRILYAMNELGMTPD
KAHKKSARIVGDVIGKYHPHGDSAVYETMVRMAQDFSYRYMLVDGHGNFGSVDGDSAAAM
RYTEARMSKISNELVRDIRKDTVDYQDNYDGAEKEPVVLPARFPNLLVNGASGIAVGMAT
NIPPHQLGEVIDGLLALSQNPELSVDELMEYIPGPDFPTAGLIMGRSGIRRAYHTGRGSI
TLRANAHINEQKNGKEEIIVTELPYQVNKARLVEKIAELVKEKKLDGITDLRDETSRNGM
RIVIELRKDANANVILNNLYKWTMMQTTFGVNLLALVNGQPEVLNLKQSLSLYLDHQVEV
IRRRTQFDLNKAEARAHILEGLRIALDHIDAIIDLIRSSETTDIARQGLIENYDLSHEQA
QAILDMRLQRLTGLERDKIEDEYKGLIERITELKAILADNEKVLDIIRDELGDIKKRYND
ERRTAIHASENVLEDADLIPQENVVISITHEGYIKRLPLTTYRSQRRGGRGIQGMGTNDG
DFVEHLFTTNSHHTILFFSNKGKVYRLKAYEVPELKRSAKGIPLINLLQIEKGEEISTVI
PIEKYRDDAYLLFITKKGIAKRTPLSAYANIRKGGLFAINIRENDELLGVRLTDDASDVI
LGTKKGIAIRFNEDDVRLMGRTATGVKGISLDQDDEVIGMDMIQEDQDVLLVTNKGFGKR
TKEDEFKVQNRGGKGLKACTLTDRTGHLIALRVISDEYDLMVMTEKGIIIRIHVNEISKL
GRYAQGVMLIRVDENEEVSTVAPVEAEEIEEENQEEEESAPEDDE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcacgaatctaatgttcatgaaattaatataagtcaagagatgcagtcatcg
ttcctggattatgccatgagcgttatagtcagtcgtgcccttcccgacgttcgtgacggc
atgaaacccgtgcaccggcgcattctttacgcgatgaacgaacttgggatgaccccggac
aaagcccataaaaaatcagcgcgaattgtcggagatgtgatcggtaaataccatccccac
ggcgatagtgctgtctatgaaacaatggtgcgaatggcacaggatttcagttaccgttat
atgctcgttgacggacatgggaacttcggttcggtcgacggggattctgctgccgccatg
cggtatacggaagctcggatgtcaaaaatatccaacgagcttgttcgggatattcgcaaa
gacacagtggattatcaagacaattacgatggtgccgagaaggaacctgtcgtgttacca
gcgcgttttcccaacctgctcgtgaacggtgcatccgggatcgcagtcggaatggcgacg
aacattcccccacaccaattgggagaagtaattgatgggttattggcactgagtcaaaac
cctgagttaagtgtggacgaattgatggagtacattcccggtcccgattttccaacggca
ggtttgatcatgggtcggagcggaatccgaagagcataccacacaggtcggggatccatc
acgttgcgggccaatgcccacattaacgaacaaaaaaacggcaaagaagaaattatcgtc
acggaattgccataccaagtgaataaagcgcgtctcgttgaaaaaattgccgagcttgta
aaggagaaaaagctcgatggaatcacggacttgcgtgatgaaacatctcgcaacggcatg
cgcattgtgattgaacttcgcaaagatgcaaacgccaatgtgattttaaacaatttgtat
aaatggacgatgatgcaaacgacgtttggcgttaatctattggcccttgtgaatggacag
ccggaggtcctcaatcttaagcaatcgctaagcctttaccttgatcatcaagtggaagtt
attcgccggcgcacccagttcgatttgaacaaagcagaagcacgcgcacatattttggaa
ggcctaagaattgccctcgaccatattgatgcgatcatcgatttgattcgctcatctgaa
acgaccgatattgcccgtcagggcttgatcgagaactatgatctaagccatgaacaagcg
caagcaatccttgatatgcgcttgcagcgcctcaccggccttgaaagggataaaatcgaa
gatgaatataaagggttgatcgagcgcatcacggaattaaaagcgattttggcagataat
gaaaaagtcctcgatattattcgcgatgaactgggtgacattaaaaaacgttacaatgat
gaacgccgtacagccattcatgccagcgaaaatgtactcgaagacgcagatttaattccg
caagaaaacgtcgtgatcagcattacgcatgaagggtacattaaacgcttgccgcttacg
acatatcgtagccagcgccgcggaggccgtgggattcagggaatgggcacaaacgatgga
gattttgtcgagcatttgtttacgaccaactctcatcacacgatccttttcttttcaaac
aaaggaaaggtttatcgcctgaaagcatatgaagttcccgagttaaaacgatcggccaaa
gggattccgctgatcaaccttctgcaaatcgaaaaaggggaagaaatcagtacagtgatc
ccgattgaaaaataccgggacgatgcctatctattgtttattacgaaaaaaggcattgcc
aaacgaaccccattatctgcatatgcgaatattcgtaaaggcggactcttcgccattaat
atccgggaaaatgatgaactgctcggcgtacgtcttacggatgatgccagtgatgttatt
ctcggcaccaaaaaaggaatcgccatccgatttaatgaagacgatgtaaggctcatgggc
agaacagctaccggtgttaaagggatctcccttgaccaagacgatgaagtcattggcatg
gacatgattcaggaagatcaagatgtgctcctcgtcaccaacaaaggttttggaaaaaga
acaaaagaagacgagttcaaagtgcaaaatcgtggcggaaaaggcctaaaagcatgcacg
cttaccgatcgaaccgggcatttgatcgcactcagagtcatttccgatgaatacgatttg
atggtaatgacagaaaaaggcattatcattcgtatccatgtcaacgagatctcgaaactc
ggacggtatgcccaaggcgtcatgctcattcgagtcgatgaaaatgaagaagtttcaacc
gtagcccccgttgaggcggaagaaatagaagaagaaaatcaagaagaagaggaaagcgca
ccggaagacgatgaataa
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