Salicibibacter cibi: HUG20_00060
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Entry
HUG20_00060 CDS
T07369
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
scib
Salicibibacter cibi
Pathway
scib00750
Vitamin B6 metabolism
scib01100
Metabolic pathways
scib01240
Biosynthesis of cofactors
Module
scib_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
HUG20_00060 (pdxS)
Enzymes [BR:
scib01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
HUG20_00060 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
IGPS
His_biosynth
NanE
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
QQK78477
UniProt:
A0A7T6Z859
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Position
13703..14587
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AA seq
294 aa
AA seq
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MADTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVAR
MADPNILEEVIEAVSIPVMAKARIGHIAEARVLEALGADYIDESEVLTPADDIYHIDKST
YTVPFVCGARDLGEALRRIGEGASMIRTKGEPGTGNIVEAVRHMRMVQGQIKKVAAMSRD
ELMTEAKNLGAPYELLVSIQESGKLPVVNFAAGGIATPADAALMMSLGSDGVFVGSGVFK
SDEPQKFARAIVEATTHFEDYELIGRLSKGLGTAMKGIEISNIPEPERMQDRSL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttggcagatacaggtacagatcgcgttaaacgaggaatggctgagatgcaaaaaggcggc
gtcattatggacgttgtcaatgcagaacaagcaaaaattgccgaggaagcaggcgccgtt
gccgttatggcacttgaacgtgttccttcagatatacgagccgcgggcggggtcgcccgg
atggcagatccaaatatattggaagaagtgatcgaagcggtgagcattccggtcatggcg
aaagcgcggatcggtcacattgcggaagcgcgcgtgctggaagcgctcggcgctgattat
atcgatgaaagcgaagtgcttacacctgctgacgacatctaccatattgataagagcact
tataccgtaccgttcgtttgcggcgcccgcgacttgggcgaggcgttacgccgcattggc
gaaggcgcgtcgatgatccggacaaaaggagaaccgggcacgggcaatattgtggaagct
gtccgtcatatgcgcatggtgcaggggcaaattaaaaaagtagcggccatgtcccgtgat
gagttaatgaccgaagcgaagaacttgggagccccttacgaacttctcgtttccattcag
gaatcgggcaagttgccggtcgtcaactttgctgccggcgggatcgctacccccgcagac
gcggcattgatgatgtcgctcggttccgatggtgttttcgtaggatccggcgtattcaaa
tcggatgagccgcaaaaatttgcacgcgccatcgttgaggcgacgacacactttgaagat
tacgaattgatcggccgtctatcaaaaggcttgggaacagccatgaaaggcattgagata
tccaatatccctgagccggaacgtatgcaagatcgcagtttataa
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