Salicibibacter cibi: HUG20_01565
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Entry
HUG20_01565 CDS
T07369
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scib
Salicibibacter cibi
Pathway
scib00061
Fatty acid biosynthesis
scib00071
Fatty acid degradation
scib01100
Metabolic pathways
scib01212
Fatty acid metabolism
scib02024
Quorum sensing
scib04146
Peroxisome
Module
scib_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HUG20_01565
00071 Fatty acid degradation
HUG20_01565
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HUG20_01565
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUG20_01565
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scib01004
]
HUG20_01565
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scib04147
]
HUG20_01565
Enzymes [BR:
scib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HUG20_01565
Lipid biosynthesis proteins [BR:
scib01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HUG20_01565
Exosome [BR:
scib04147
]
Exosomal proteins
Exosomal proteins of breast milk
HUG20_01565
Exosomal proteins of breast cancer cells
HUG20_01565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
WcbI
Motif
Other DBs
NCBI-ProteinID:
QQK78715
UniProt:
A0A7T6Z8D1
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All DBs
Position
304897..306738
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AA seq
613 aa
AA seq
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MDPNNLVEMLSQTVNRYPDEEALMWKQSGSYTSMTYREFWKTIRNVASGLHRLGVKPEDK
VAILSKSSQSWAISDFAIASIGAISVPVYPTLPSNQVSYVLNNGDCTVVIAEDDEQLQKF
KDENTKVQHSIVMKPGSGFTSTDNISSFSSLEGDGANHPLKDWEEQWKAIKGDQLMTIIH
TSGTTGPPKGVMLTHDNFLSQMKAIQFWVIELRAEDIHLSYLPLSHVFERMAGHFMPLMA
GTTIAYAESIDTIQDNLQEVKPTIMTSVPRLFEKVYAKVVDQIESGSPMKRKIFNWAVDV
GKERYDYYVNTPVHELVLQPMPKKLQSKMARADRLVYQTIKERLGGKMRGMVVGGGSLNP
DIAKFFWSLDIPILEGYGLTETSPVVTTNPMTRAKIGTTGKPIPGCRVRIAPDGEVLVKG
PNVMQGYYKNKEATDQDIVDGWLYTGDIGTFDEEGYLKIIDRKKRILVLSTGKNVAPAPI
ESAINESRYIEFAAVIGDGRKYVSALVTPDMENLLPWAKQQGIQTVSRVELCARDDVQQL
LMDEVARQTQSYADYERPKKVVTIGDEWTVDGGELTPKLSLRMKNIEEKYSEHIERAYDE
ASTSAKEVAAEAQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggacccgaataatttagtggagatgttaagtcaaaccgttaatcgttatccggacgaa
gaggcattaatgtggaaacagagcggcagttacacgagtatgacgtaccgggaattctgg
aagacaatccgcaatgtagcgtccggtttgcatcggcttggcgtgaagccggaggacaaa
gtggccattttgtcaaaaagcagtcagagctgggcgatttccgactttgccattgccagt
ataggggcgattagcgttccggtttatccgacacttccatccaaccaggtttcatatgtt
ctgaacaacggggactgcacggttgtcattgccgaagatgatgaacagttgcaaaaattc
aaggatgagaacacaaaagtccaacattcgattgtaatgaaacccggctcaggtttcacc
tccactgacaacatttcctctttttcttctctggaaggagacggtgccaatcatcctttg
aaagattgggaagagcagtggaaggcgattaagggtgaccagttaatgacaatcattcat
acgtccggtacgactggtcctcccaaaggggttatgcttacccacgacaatttcctgagt
caaatgaaagccattcaattttgggtgatcgaattaagagcggaagatattcacctctcg
taccttccgctatcgcacgtgttcgaacgaatggcaggacattttatgcctcttatggcc
ggaacgacaattgcttacgccgaaagcattgatacgattcaggataatttgcaagaagtg
aagccgacgatcatgacgagcgtgccgcgtctgtttgagaaagtgtacgcgaaagtggtc
gatcagattgaaagcggttcaccgatgaaacgaaaaattttcaattgggcggttgatgtc
gggaaagaaagatatgattactatgtaaatacgcccgtgcatgagttggtgcttcaacca
atgccgaaaaagctccaaagcaaaatggctcgcgccgaccgcttggtgtatcaaacaatt
aaagaacggcttggcggcaaaatgcgcgggatggtcgtgggcggcggaagcctgaatcct
gacattgccaagtttttttggtcacttgatattccaatactggaaggatacggcttaacc
gagacatccccggttgtgacgacaaacccgatgacaagagccaaaattgggacgacggga
aaaccaattcctggttgcagagtgcgtatcgctcccgatggagaggtactcgtaaagggg
cccaacgtcatgcaaggctattataaaaataaggaagcaacggaccaagacatcgtggac
ggttggctttataccggagacatcggaacattcgatgaagaaggctatttgaaaatcatc
gaccgaaagaaacggattctcgtattgtccaccgggaaaaatgtagccccggctccgatt
gaaagcgcgatcaatgaaagccgttatatcgaatttgccgctgtgatcggggacggccgt
aaatatgtatccgcgcttgtcactccggatatggaaaacctgcttccgtgggcgaaacaa
caaggaattcaaaccgtatcgagagtggaactgtgcgcacgtgacgacgtgcaacaactg
ttgatggatgaagttgcgcgtcaaacgcaatcttacgctgattacgaaaggcctaagaag
gtggtcaccattggtgatgagtggaccgtcgatggcggagaattgaccccgaaattatca
ctgagaatgaaaaatatagaggagaaatatagcgaacacattgaaagagcgtacgatgaa
gcgtccacctctgcaaaagaagtagctgcagaagcacaatag
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