Salicibibacter cibi: HUG20_02680
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Entry
HUG20_02680 CDS
T07369
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
scib
Salicibibacter cibi
Pathway
scib00630
Glyoxylate and dicarboxylate metabolism
scib00680
Methane metabolism
scib01100
Metabolic pathways
scib01120
Microbial metabolism in diverse environments
scib01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HUG20_02680 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
HUG20_02680 (fdhF)
Enzymes [BR:
scib01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
HUG20_02680 (fdhF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_7
Fer4_10
Fer4_8
Fer4_21
Fer4_6
Fer4_2
Fer4_9
Fer2_3
DUF5837
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
QQK78915
UniProt:
A0A7T6Z8J4
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All DBs
Position
537010..539955
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AA seq
981 aa
AA seq
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MPDVTVNGKRIHAKEKQNVLDVLTEHDIEVPSLCYHPSLGAIETCDTCIVSVNGELVRSC
SATVKDGDAIATNEEAHEAQLIAMDRILGNHELYCTVCDYNNGNCEIHNAVKEMRMSHQE
TPFDFKPYEVDRNAFYRYDPDQCILCGRCVEACQDVQVTETLTIDWDRQRPRVIWDKDSP
IEESSCVNCGHCSTVCPCNAMMEVGMEGEAGFLTGIKDSSMRPLINITKEVETGYEQLMT
ISDMEASMRENRIEKTKTVCTYCGVGCSFDVWTKDRKVLKVEPQSEAPANGISTCVKGKF
GWDFVNSEERLTKPLIREGDAFREAEWEEAYDLIVHKFKEEKEKNGPDSLAFITSSKCTN
EDSYVMQKLSRAVIGTNNVDNCSRYCQSPATMGLWRTVGYGGDSGSITDIEKAELVIITG
SNTAEAHPVLATRVKRSQKLHGQKVIVADLRKHEMADRADRFVQPKAGSDLVWISAVTKY
IIDKGWHDQAFLDEHVNGLKDYIKSLEPYTLDYAEEVTGLTKEEMIEIATSIHEAETTSF
LWAMGITQHGGGSDTSTAISNLMLVTGNYMKPGAGTYPLRGHNNVQGASDFGSMPDRFPG
YEKVHDDAVRERYEKGWDVDLPAEPGLNNHEMVAAIHDGNLNVMYLKGEEMGIVDSNANY
VQEALEKLDFFVVQDIFFSKTAEFADVVLPASPSFEKEGTFTNTERRFQRLYQVFDPLGD
SKPDWKIIMEIANRMGANWNFEHPSEIMDEAASLAPMFAGVSYDRLEGYNSLQWPVAADG
TDTPLLFENRFPFPDGKAKLFPVEWTKPLEMGEEYDLHVNNGRMLEHFHEGNLTYKSEGI
TKKTPSVFLEVSPELAKERGLEDGTVVRLTSPYGNVKVPCLVTDRVKGKELYLPMNDSGD
GAINYLTSSHADKDTDTPAYKEVSAKMEILEPKGESPLPRINHRNGNPQPQIGVAVEKKW
ERKDYTFPGDLVKERRSQHNG
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgtaacggtaaatggcaagcgtatacatgcaaaggaaaagcagaacgtactg
gatgtattgactgaacatgacattgaagtgccaagcctgtgttaccacccaagccttggt
gctattgaaacgtgtgacacgtgcatcgtcagtgtgaacggagaattggtacgttcgtgc
tccgcgacggtaaaggacggagacgcgatcgctacgaacgaagaggcacatgaagcacaa
ctaatcgcgatggaccgcattctcggtaatcatgaactgtactgtacagtctgtgattac
aacaacggcaactgcgagatacataatgcggtcaaagagatgagaatgagccatcaagag
accccttttgatttcaagccctatgaagtggaccgcaatgctttctatcgttatgatccc
gatcagtgcattttgtgcgggcggtgtgtggaagcttgtcaagacgtgcaagtaacggaa
acgctaacgatcgattgggacaggcagcgcccgcgcgttatctgggacaaggactctcct
atcgaagaatcttcttgtgttaattgcgggcattgttcgacggtgtgcccgtgcaacgcc
atgatggaagtgggcatggaaggcgaagctggttttttaacgggaattaaagattcctcc
atgcgcccgctcatcaatattaccaaagaggtagaaacgggttatgagcaactcatgacc
atctcagatatggaagcctcgatgcgagaaaatcgcattgaaaaaacaaaaaccgtatgt
acgtactgtggagtaggttgctcctttgatgtctggacgaaagatcgcaaagttctcaaa
gttgagccgcagtcggaagcgccggcaaacggaatttctacttgtgtaaaagggaagttt
ggctgggactttgtcaatagtgaggagcggttgacgaaaccgctgattcgggaaggagat
gctttccgggaggcggaatgggaagaagcttacgatttgatcgtccataaattcaaggaa
gaaaaagagaaaaacggtcccgactcacttgcgtttattacgtcttccaaatgtacgaac
gaagattcatatgtcatgcaaaagctcagccgcgcggtgatcggaacaaacaacgttgat
aattgctcccgttattgccaatccccggccacgatggggctatggagaacggttggttac
ggcggcgattctggaagtatcacagacatcgaaaaagctgagctcgtcattattaccggt
tcgaatacggcggaagcccatccggtacttgcgacaagggtgaaacggtctcaaaaactt
catggacaaaaagtaattgtcgcggatctgcgtaaacacgaaatggccgatcgggccgac
cgttttgtccaaccgaaagcgggatcggatctcgtctggatttcagccgtcacgaaatac
atcattgataaaggttggcatgaccaggcgtttttagatgagcatgtcaacggcttaaaa
gattatatcaaaagccttgaaccgtacaccctcgattatgccgaggaagttaccggtttg
acgaaagaggaaatgatcgagattgccacatcgatccacgaagcggaaacgacgagcttt
ttatgggcgatgggcatcacgcaacatggcggaggctctgacacgagcacggccatatcg
aacttgatgctcgtgaccggcaattacatgaaaccgggtgcgggaacgtatccgttgcgc
ggacataacaacgtccaaggcgccagtgactttggcagcatgcctgatcgtttcccgggt
tacgaaaaagtgcacgatgatgcggtccgtgaacgttatgaaaaaggctgggatgtggat
cttccggcagaacccggattgaataatcatgaaatggtcgctgctatccacgacggaaat
ttaaatgtgatgtacctaaaaggggaagagatgggtatcgtcgattccaacgccaattat
gtgcaagaagcactcgaaaaattggatttcttcgtcgtccaggacatctttttttcaaaa
acggccgagtttgcggatgtagtgttgcctgcgtctccaagttttgaaaaagagggaacg
tttacgaatacggaacgccgttttcagcgtttgtatcaagtgttcgatccgctcggcgat
tcaaagcctgattggaaaattattatggaaatcgccaatcgcatgggtgcaaactggaac
ttcgagcatccaagcgaaattatggatgaagcagcctccctggccccgatgtttgcaggc
gtcagctatgatcgcctggaagggtataacagcttgcaatggccggtagccgcagatggc
acagatacgccgcttctattcgagaatcggttcccgtttccggacggcaaagcaaagctt
tttcctgtggagtggacgaaaccgcttgagatgggtgaagaatatgaccttcacgtcaat
aacgggcgtatgctcgaacatttccacgaaggaaatctgacgtataaatccgaagggata
acgaagaaaacaccgagtgtttttcttgaagtctctccggaacttgcgaaagaacgcggg
ctggaagatggaacggtggtgcgtttaacgtcgccttacggcaatgtgaaagttccttgt
ctcgttacggatcgcgtaaaaggcaaagaactgtatttgccgatgaatgactcgggcgat
ggagcgattaactatttaacgagcagccatgccgataaagatacggatacccccgcttat
aaagaagtctcggccaaaatggaaattctggaaccgaaaggagaaagcccattgccgaga
atcaaccatcgcaatggcaacccgcaaccgcaaataggggtagcggtggaaaagaaatgg
gaacgcaaggattacacatttccaggcgatctcgtgaaagaaaggaggtctcagcacaat
ggctaa
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