Salicibibacter cibi: HUG20_03010
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Entry
HUG20_03010 CDS
T07369
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scib
Salicibibacter cibi
Pathway
scib03420
Nucleotide excision repair
scib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUG20_03010
03430 Mismatch repair
HUG20_03010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scib03400
]
HUG20_03010
Enzymes [BR:
scib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUG20_03010
DNA repair and recombination proteins [BR:
scib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUG20_03010
MMR (mismatch excision repair)
Other MMR factors
HUG20_03010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
Viral_helicase1
AAA_30
PhoH
SLFN-g3_helicase
DEAD
nSTAND3
NACHT
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QQK78976
UniProt:
A0A7T6Z8N1
LinkDB
All DBs
Position
616719..619001
Genome browser
AA seq
760 aa
AA seq
DB search
MSQEHIDWEKESERLQAVISRVKKKKESLKEESNELKDDVIELRRTFWDDVTVNLDEPDD
VIETQASLKQRAELLSERERSHGLLHQQKKTLNKLEESPYFGRIDFTEDGENETEPIYIG
IASLMDKNDEEFLVYDWRAPISGMYYDFAPGRAHYPTLDGDVEGDITLKRQYIVRSGKLE
GMFDTGLTIGDELLQSLLGQQSSPQMKSIVASIQREQNQVIRNERSKMLIVRGAAGSGKT
SAALQRVAYLLYKHREKLDAGNMLLFSPNPLFTRYVSNVLPELGEDNLQQSTLFQHFEKR
LPNGWELESPHAHIEYFLSEQVESTRSQGLSVKTDPRFIEHLHDYVVSLSRAGLIFKDLY
FRGEVWVSKEQLQDYFYQMASSVSMSDRLEMVAEWLLQMLQITEREERPKAWVDEKMDLL
DQETYNQVFEKVAENEGAFNDAVLQEDLLRKLVVRRAVKPLRKQIQTFDVLDAEAMYIQF
FRWAGYKVIAEEIAYHFQKKEMHWEDAAPFFYFEDLLKGRPIYADIRHIFIDEAQDYTTI
QIRYLQHLFPSSRLTLLGDANQAVHAHTSAGNAPLAEDPAAKEQETITLHRSYRSTQPIV
EFTKQLIPNGEQIEAFERPGPIPEMKQLENEAQHNRYVGTLAKQLEESELGMVAIVTKTF
AESEKIWGQLEKAGRDVQLIHEQTSEFKAALLVLPVYLAKGIEFDAVVVSDASAANYHRE
RDRYLLYTACTRAMHGLYLCANGAFSPFITGSAYKHYIQG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcaggaacatatcgattgggaaaaagagagtgaacggttgcaggccgtcatttcc
cgtgtgaaaaagaaaaaagaatcattaaaagaagaaagcaatgagctgaaagatgatgtc
atcgagcttcggcgcacgttttgggatgatgtgaccgttaaccttgatgagccggatgat
gtcattgaaacgcaagcaagcctgaagcaacgcgccgagttgctgagtgaacgtgagcgc
agccacgggcttcttcatcaacaaaaaaagacattgaataaattagaagaaagtccttat
tttggccgaatcgatttcacagaagacggggaaaacgaaacggaaccgatttatatcggc
atcgcttcgttgatggataaaaacgatgaagaatttctcgtttacgattggcgtgcacca
atttccggcatgtattacgactttgcgccagggcgtgcccattacccgacgttagacgga
gatgtagagggcgacatcaccctgaagcgacaatacattgtaagaagcggaaagcttgaa
ggaatgtttgataccggactgacgattggcgatgagcttttacaatcattgctcggccag
caatcgtccccgcaaatgaagagcatcgtcgcctcgatccaacgggaacaaaaccaagtg
atccgcaatgaacgaagcaaaatgctcatcgtacgcggagccgcgggaagcgggaaaaca
tcagcggcgctgcagcgcgtggcttatctcctgtataagcaccgggaaaagttggatgcc
gggaatatgttgttattttcgccaaatccgctgtttacccgttatgtttccaacgtcctt
ccggaactgggggaagataacctgcagcagtcaacgctctttcaacattttgaaaaacgg
ttgccgaacggttgggagttggaaagtccccacgcccatattgaatattttttatccgaa
caggttgaatcgacccgctcccaaggcttgtcggtgaaaacggaccctcgtttcatcgaa
catcttcacgattatgtagtctcgctctcccgcgccggtcttatttttaaagatctttat
tttcgcggagaggtatgggtgtcaaaggagcaacttcaggactatttttatcaaatggcg
tcgtccgtgtcgatgtctgaccgtctggaaatggtggccgaatggctgctccaaatgttg
caaatcaccgaaagagaagaaaggccgaaagcctgggtcgatgagaaaatggatctgttg
gatcaagagacgtacaaccaggtgtttgaaaaggtagcagagaatgagggggcattcaac
gatgccgtattgcaagaggatttattgcgaaagctcgtcgttcgtcgcgcagtaaaaccg
ctgagaaaacaaattcaaaccttcgacgttctggatgcggaagcgatgtatatccagttt
ttccggtgggcagggtataaagtgattgccgaggaaatcgcgtatcattttcaaaaaaag
gagatgcactgggaggatgccgcgccttttttctattttgaagacctgttaaaaggaagg
ccaatctacgcggatatccgccatattttcatcgatgaagcccaggactatacgacgatc
caaatccgttatctgcagcatttgtttccatcaagccggctgacgttgcttggcgatgcc
aatcaagcggtgcacgcgcatacaagcgcggggaatgcgccactggcagaggatccggct
gcaaaagaacaggaaacgatcacgttgcatcggagttatcgttctacgcaaccgatcgtt
gaatttacgaagcagttgattccgaatggcgaacagatcgaggcttttgaacggccgggg
ccgatcccggagatgaagcagctggaaaatgaggcgcagcataatcgctatgtgggcacg
cttgccaagcaactcgaagaaagcgaattgggcatggtggcgattgtgacgaagacgttc
gcggaaagtgaaaagatatgggggcagttggaaaaggcagggcgggacgtgcaacttatt
catgaacagacgtctgagtttaaagcggcactgctcgtattgcccgtctatctcgcgaaa
gggattgaatttgatgcggtggtcgtcagtgatgcgtctgcggcaaattatcatcgcgag
cgggaccgttacttgctttatacagcctgcacgcgcgcgatgcatggattgtatctatgt
gcgaatggtgcgttttctccttttattacggggagtgcctataagcattatattcaagga
tag
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integrated database retrieval system
