Salicibibacter cibi: HUG20_05265
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Entry
HUG20_05265 CDS
T07369
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
scib
Salicibibacter cibi
Pathway
scib00260
Glycine, serine and threonine metabolism
scib00460
Cyanoamino acid metabolism
scib00630
Glyoxylate and dicarboxylate metabolism
scib00670
One carbon pool by folate
scib00680
Methane metabolism
scib01100
Metabolic pathways
scib01110
Biosynthesis of secondary metabolites
scib01120
Microbial metabolism in diverse environments
scib01200
Carbon metabolism
scib01230
Biosynthesis of amino acids
scib01240
Biosynthesis of cofactors
scib04981
Folate transport and metabolism
Module
scib_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HUG20_05265
09102 Energy metabolism
00680 Methane metabolism
HUG20_05265
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HUG20_05265
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HUG20_05265
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HUG20_05265
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HUG20_05265
Enzymes [BR:
scib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HUG20_05265
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
SelA
Beta_elim_lyase
INSC_LBD
Motif
Other DBs
NCBI-ProteinID:
QQK79354
UniProt:
A0A7T7CER9
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All DBs
Position
1047696..1049027
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AA seq
443 aa
AA seq
DB search
MSMVETNYEVHDTKVLNWAKEIIEGSPSEQLVQQEVINAVERNAIWRGQECLNLLAPEAP
TSPAVRRLLSAEVGTRAAEGHIGSQQRWFAGTKYIDEIESLCIELLKKVFDSNYADHRLV
ASMIGNMAVYTALTEPGDDIMTLSQPFGGHSSNRNDGPAGVRGLKVTDVPMDPVELEVDL
DKFAAKAREKKPKVVSLGASMTLFPFPLKQMKEIVSEWEGKIFFDGAHQLGLIAGGKFQD
PLNEGADVMTGSAGKTFSGPQSGIMVWDDVNLTKPFTDTIFPTLAATHQVNRVAALAVSC
AEFLAFGKDYMEQIVTNAKALGNALHQRGISVLGSDKDFTETHQVILDVKRFGGGYEVAN
KLAEANIITNKNLIPGDRPEDWDYPNGLRIGTTEITRKGMKEPEMEMIADYIDQLLNNRE
TPENVKLKVLDMTTSFQKIHYCF
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggtagaaacaaattatgaagtgcacgatacaaaagttttaaactgggcgaaa
gaaataattgaaggaagtccatctgaacagttagttcagcaggaagttattaatgctgtg
gagcgaaatgccatctggagaggacaagagtgtttgaatctcctcgctccggaagcccct
acaagcccggctgttcgcagattgttatcagccgaagtgggaacacgagcagcagagggg
catatcgggagccaacaacggtggtttgccgggacaaaatacattgatgaaattgaatcc
ttgtgcattgaactgttaaaaaaagtatttgactcaaattatgccgaccaccggctagtg
gcaagcatgattggcaatatggccgtttacacagcattaacagaaccgggtgacgacatt
atgacattgtctcaaccgttcggtgggcattcgagcaaccgcaacgatggacctgcgggt
gttcgaggattgaaagttacagacgttccgatggacccagttgaactcgaagttgatctc
gataaatttgcggcaaaagcacgagaaaaaaaaccaaaagttgtatcgctaggggcttcc
atgaccttatttcctttccctctcaaacaaatgaaagagattgttagcgaatgggaagga
aaaattttctttgacggtgcccaccaattagggcttattgccggagggaagtttcaagat
cctttaaatgaaggcgcagatgtgatgaccggatctgcagggaaaacgtttagcggtcca
caaagcgggattatggtctgggatgatgttaatcttacgaaaccatttaccgatacgatt
ttccctacccttgcagctacgcatcaagtcaatcgcgttgccgctttagcggtgtcttgc
gccgaattcctggcatttggaaaagattatatggaacaaattgttacaaacgccaaggct
ctcggaaatgcgcttcaccaaagaggaatttccgtactcggttccgataaagacttcacg
gaaacccatcaagttattctcgatgtaaaaaggttcgggggtggctacgaagtagccaat
aagctggcggaagccaatattataacaaataaaaatctcatacctggcgaccgccccgaa
gactgggattatccaaacggtctcagaatcggaacaacggaaattacaagaaaaggcatg
aaagaaccagaaatggaaatgattgctgattacatcgatcagctccttaataacagagaa
acacctgaaaatgtaaaattaaaagtccttgatatgaccacatcattccaaaaaattcat
tattgtttttga
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