Salicibibacter cibi: HUG20_06315
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Entry
HUG20_06315 CDS
T07369
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
scib
Salicibibacter cibi
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scib03019
]
HUG20_06315 (yhaM)
Messenger RNA biogenesis [BR:
scib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HUG20_06315 (yhaM)
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QQK81886
UniProt:
A0A7T6ZE77
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All DBs
Position
1239776..1240717
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AA seq
313 aa
AA seq
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MEKGIYYGKAGDKIDRHLLIRQATRGIASNGKPFLTLRLSDNSGDIEAKLWGVKPEDERT
YTGKTIVSIQGEVFDYRGRLQLKIARIRPVSDQDQVKIEDLVPTAPMKKTDMFEHINQFV
FDIENAKIQRMTRFLLKKHQHAFLDAPAATRNHHEFMSGLAYHVVCMLQLAQSVVQLYPS
LNKDLLYAGIILHDLGKVRELSGPIDTEYTIEGNLIGHISLMAAEIRQTASELKIEGEEP
MLLEHLILSHHGKGEWGSPKPPLLREAEILHYIDNLDAKMNMMDRALGKTEEGHFTERIP
ALENRTFYKPKNI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggaatttattacgggaaagccggcgataaaattgatcgccacttgctcatt
cgtcaagcgacacgagggatagccagcaacggaaagccgtttttaacgttgcgattatcg
gataatagcggcgatattgaggcgaaattatggggagtcaaaccggaagacgaacgtacg
tataccggaaaaacgattgtttctatacagggagaagttttcgattatcgcgggcgtttg
cagttaaaaattgcccggatacgaccggtaagcgatcaagatcaagtgaaaatagaggat
ctcgtaccgacggcccctatgaaaaaaacggatatgtttgaacacatcaatcagtttgtt
tttgatatcgaaaacgctaaaatccaacgaatgacacgttttttgcttaaaaagcaccaa
catgcatttttggacgctccggcagcaacgagaaatcaccatgagtttatgtccggactt
gcttatcacgtcgtatgtatgcttcagctcgcccaatcggttgtgcaattgtatcccagt
ttgaacaaagatttgctttatgccgggatcatcttacacgatcttggcaaagtgcgagaa
ttgtcgggaccgattgacacggaatatacgattgagggaaacctgatcgggcatatctct
cttatggctgcagaaatccggcaaacagcctctgaattgaaaattgaaggggaagaaccg
atgttgctggaacaccttattctaagccaccacggaaaaggagaatggggaagcccgaaa
cctccgcttttacgagaagcggaaattctgcactatatcgataatcttgatgcaaaaatg
aatatgatggatcgggcgttgggaaaaaccgaagagggccatttcacagaacgtatcccc
gctttggaaaatcggacattttacaagccgaaaaatatttaa
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