Salicibibacter cibi: HUG20_06550
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Entry
HUG20_06550 CDS
T07369
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
scib
Salicibibacter cibi
Pathway
scib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HUG20_06550 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scib01007
]
HUG20_06550 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scib03016
]
HUG20_06550 (aspS)
03029 Mitochondrial biogenesis [BR:
scib03029
]
HUG20_06550 (aspS)
Enzymes [BR:
scib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HUG20_06550 (aspS)
Amino acid related enzymes [BR:
scib01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HUG20_06550 (aspS)
Transfer RNA biogenesis [BR:
scib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HUG20_06550 (aspS)
Prokaryotic type
Other AARSs
HUG20_06550 (aspS)
Mitochondrial biogenesis [BR:
scib03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HUG20_06550 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QQK79567
UniProt:
A0A7T6Z9Z6
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All DBs
Position
1285918..1287702
Genome browser
AA seq
594 aa
AA seq
DB search
MAKKERSHYCGEITESMIGENVRLKGWARTRRDLGQVIFIDLGDSSGIVQTVFNPDISEK
ALTIADGVRSEYVLDVQGKVVLRDEETVNEKIATGTVEVQVEEIAILNKSKPLPFSMDED
INVSEDVRLSHRYLDLRRPEMQRIFQLRHKITQETRNYLNEHSFMEAETPMLTKSTPEGA
RDYLVPSRVHEHEFFALPQSPQLFKQLFMIAGFERYYQIARCFRDEDLRADRQPEFTQID
IEASFMDKEALFSMTEEMMARLLKISHDFDVTTPFPRMTYHEAMHRYGSDKPDTRFGMEL
VELSDIVKNSRFQVFTKALENNGIVKGLNAKGQGDGMSRKEIDDLAEFAAIYGAKGLAWL
RVESPDSLKGPIAKFLNEDEQRQVMEAMEAEQGDLLLFAADESSVVFDVLGALRLKFGKE
LGLIDEKAFHFLWVTDFPLVEYDKDTNRHVALHHPFTRPVEEDIDKLETAPEEVTADAYD
LVLNGYELGGGSQRIHEPDLQMKMFRTLGFSEEKAKEQFGFLIDALSYGAPPHGGIALGL
DRIVMLLAEADNLREVIAFPKTASAGDLLTGAPSSVSEEQWKELHLRPRQQPGQ
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaggaaagaagccattattgcggtgagattacggaaagcatgatcggcgaa
aatgttcggctcaaaggttgggcgagaacgaggagagatttggggcaagttatttttatt
gacctcggcgattccagcgggatcgtccaaacggtttttaaccctgatattagtgaaaaa
gctttaacgattgctgatggcgtccgtagtgaatatgtgcttgatgtgcaagggaaagtc
gttctccgggacgaggaaacggtgaatgaaaagattgctaccggaactgtggaagtgcaa
gtcgaggaaatagccattctaaacaaatcaaaaccgttgcctttttcaatggacgaagat
atcaacgtctccgaagatgtgcgtttgtcccatcggtatcttgatttgcggcgaccggaa
atgcaacgcatttttcaattgcgtcacaaaattacccaggaaacccgcaattacttaaat
gagcattcatttatggaggcggagacgccgatgttgacgaaaagcacgccggaaggcgca
cgtgactatttggtcccaagccgtgtgcatgagcacgaattctttgcgcttccgcaatcg
ccgcagctttttaaacagctgtttatgattgccggttttgagcgctactatcaaattgcc
cgctgtttccgtgacgaagatcttcgcgcggaccggcaaccggagtttacgcaaattgat
atcgaagcatcgttcatggataaagaagcgctgttttccatgaccgaagaaatgatggcg
cggttattaaaaattagccatgatttcgatgtgacgacgccttttccacgcatgacctat
catgaagcgatgcatcggtatggttcggataaacccgatacacgcttcggtatggaattg
gtggagctttccgacattgttaagaacagtcgttttcaagttttcacaaaagcgcttgaa
aacaacggcatcgtgaaagggttgaatgcaaaaggacagggggatggcatgtccagaaaa
gagatcgatgatctcgccgaatttgccgcgatttacggagcgaaagggcttgcctggttg
agggttgagagccccgactcgttaaaagggccgattgcgaaatttttaaatgaagacgag
caacgtcaagtgatggaagcaatggaggcagagcaaggagatttactgttgtttgctgcc
gatgagtcaagcgttgtgtttgatgtgttaggcgcattgcgcttaaaattcggaaaggaa
cttgggctcattgatgaaaaagctttccatttcctttgggtgaccgacttcccgctcgtt
gaatatgacaaagataccaatcgccatgttgctcttcaccatccatttacgcgaccggtt
gaagaagatattgacaaactggaaacggctccggaagaagttacggcagatgcctatgat
ctcgttttgaatggctacgaacttggtggcggttcacagcgtattcatgagcctgacctg
caaatgaaaatgtttcgaacgcttggatttagtgaagaaaaagcgaaagagcaatttggt
tttctcattgacgccctctcttatggcgctcccccacacggaggcattgctcttggtctg
gaccgaattgttatgctccttgccgaggccgataatttgcgcgaggttattgcctttccg
aagacggcaagtgcaggcgacttattaacgggggcgccaagcagcgttagcgaagaacaa
tggaaagaattgcatttgcgtccgagacaacaacccggacaataa
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