Salicibibacter cibi: HUG20_06620
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Entry
HUG20_06620 CDS
T07369
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scib
Salicibibacter cibi
Pathway
scib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUG20_06620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scib03400
]
HUG20_06620
Enzymes [BR:
scib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HUG20_06620
DNA repair and recombination proteins [BR:
scib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUG20_06620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
Helicase_RecD
UvrD_C
SLFN-g3_helicase
HHH_5
AAA_12
DEAD
AAA_18
AAA_28
AAA
AAA_16
nSTAND3
NACHT
NTPase_1
RecR_HhH
T2SSE
AAA_17
cobW
NPHP3_N
PIF1
Herpes_Helicase
Zeta_toxin
KTI12
AAA_23
AAA_5
AAA_29
AAA_15
TsaE
Mg_chelatase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QQK79578
UniProt:
A0A7T7CEZ9
LinkDB
All DBs
Position
1299941..1302220
Genome browser
AA seq
759 aa
AA seq
DB search
MNEEWKSSMDKITGTVSHVIFRNEKNGYTVLNIRVDDATPAVDASSISVVGHFPYPPEED
LLTFYGQFREHERYGQQFNMELYEPYIPEGKPAVIQYLSSDRFPGIGKKTASRIVAELGE
SAIDKILHQPSLLYDIPDIKRQQADVLTERLMEEQEIAGVMSRLITYGFGTELATKIIQA
YKGETLEVVEKDPYQLVQDIEGIGFQKADALGVQLGIAPTEKKRLRAGLLFSLWQMSQSI
GHVYLPVDVWIEEALKVLNYRNLEVDATMLQKEIVELDEEGTVAVPDERAYLLSLFFAEK
GLATNVNRLLDTEVQETFAEDLYLKMLGELENDFKITYADRQKEAVELALKSPLMILTGG
PGTGKTTVIRAIVEMFKRLRGWNQRKEKKLPVLLAAPTGRAAKRMAETTGLKAFTIHKWL
GWRGEEEEFLEHDEENPLEGELLIIDEASMIDLWLANQLFKAIPAGMQVIIVGDEDQLPS
VGPGQVLGDLLRSEKIPSISLSSVYRQAEGSSIIDLAHDLKEGQLSADFKETKPDRSFIA
CQGTSMPDVILQICQKAMEKGYSAREIQVLAPMYKGTAGIHLLNEKLQALFNPPKQGKRS
MTYGDVVFRSGDIVLQLVNNPEDNVFNGDRGEIIALLKEKETEDGKEKLVVTFDGIEVYY
EKQDLKQITLAYCSSIHKAQGSEFPIVIVPLSMSYRRMLKRNLLYTAITRARDSLIMVGE
QRAFALAVEKNDQYSRYSHLYHRIQEASTNHENVKEGQY
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggaatggaagtcatcgatggataaaatcaccggaacggtaagccatgttatt
tttcggaatgaaaaaaatggctatacggttttaaacatccgtgtcgatgacgcaactcct
gctgttgacgcctcctccatttctgttgtcggccattttccttacccccccgaagaagat
ctattgacgttttacgggcaatttcgcgaacatgaacgttatggtcaacagttcaacatg
gaactatacgaaccttatatccccgaaggaaaaccggcggtaatccagtatttatccagc
gatcgcttccccggcataggaaagaaaaccgcctcccgtatcgttgctgaattaggcgaa
tcggcgattgataaaatcctccaccagcctagccttttgtatgacattcccgatattaag
cgtcaacaagcggatgtgctcaccgagcggttaatggaagaacaagagatcgccggtgtg
atgagccgcttgattacatatgggttcggtacggaattggccacaaaaattattcaggcg
tataaaggggagacgctagaggtagttgaaaaagacccttatcaactcgttcaggatatt
gaaggcatcggttttcaaaaggccgatgcacttggcgttcaattaggcattgcaccgacg
gaaaagaagcggcttagggcagggttgctattttctttgtggcaaatgtcccaaagcatc
ggacacgtctatttgccggtagacgtatggattgaagaggcgttgaaagtgctgaattat
cgaaaccttgaagtggatgccacaatgttgcaaaaagaaattgttgaacttgacgaggaa
ggtacggttgctgttccggacgaacgagcttatttattatcgctcttttttgcggagaag
gggctggcaacgaacgtgaatcgtttgttggacacggaagttcaggaaacgtttgctgaa
gacctgtatttgaaaatgttgggtgagttggaaaatgatttcaagatcacatacgccgat
cgtcaaaaagaagcggtagagctcgccctcaagtctccgctcatgattttaaccggtgga
ccaggaacggggaaaacaacggttattcgcgcaattgtggagatgttcaaacgcttgcgc
ggttggaaccaacgaaaagaaaaaaagcttccggttctgcttgccgcgcctacgggaaga
gctgcgaaacgaatggcagagacaaccggactgaaagcgtttactattcacaaatggctt
ggttggcgcggcgaagaagaggaatttcttgaacacgatgaagaaaatccgctcgaaggg
gagctgttgatcatcgatgaagcgtccatgattgacctatggctcgcgaatcaactattt
aaggcgataccggccgggatgcaagtgattatcgtcggcgacgaagatcaattgccatcc
gtaggaccggggcaagtgctcggggatttgcttagatcggaaaaaattccgtcgatatcg
ttgtcgtcggtttaccgccaggccgaaggttcctcgatcatcgatttggcccacgattta
aaagagggtcagttatccgctgattttaaagaaacgaaaccggatcgatcgttcattgca
tgccaaggaacgagcatgcctgacgttattcttcaaatatgccaaaaagcgatggaaaaa
ggctattctgcgcgtgaaattcaagtgctcgccccgatgtataaagggacggcgggcatt
catttgctgaatgaaaaactgcaagccctatttaatccgccgaaacaagggaagcggtct
atgacgtatggcgatgtcgtctttcgcagtggcgatatcgtcctgcaactcgtcaataat
cccgaggacaatgtttttaacggagaccgcggcgaaatcatcgctcttttaaaagaaaaa
gaaaccgaagatggaaaagaaaaactcgtcgttacgtttgacggcattgaggtgtactat
gaaaaacaggacttaaaacaaatcacacttgcgtattgttcctcgattcataaagcccaa
ggaagcgaattcccgattgttatcgttcccttatccatgtcctaccgacggatgttaaaa
aggaatttgctttatacagcgatcacgagggcgcgtgattcattaatcatggtcggcgaa
cagcgggcatttgcattggctgtggagaaaaatgaccaatacagccgctattcccatttg
taccatcgtatacaggaagcaagtaccaatcatgaaaacgtcaaggaaggacaatactaa
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