Salicibibacter cibi: HUG20_07285
Help
Entry
HUG20_07285 CDS
T07369
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
scib
Salicibibacter cibi
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scib03019
]
HUG20_07285
03009 Ribosome biogenesis [BR:
scib03009
]
HUG20_07285
Enzymes [BR:
scib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUG20_07285
Messenger RNA biogenesis [BR:
scib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUG20_07285
Ribosome biogenesis [BR:
scib03009
]
Prokaryotic type
rRNA helicases
HUG20_07285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
QQK79706
UniProt:
A0A7T6ZB08
LinkDB
All DBs
Position
1431128..1432390
Genome browser
AA seq
420 aa
AA seq
DB search
MSRFSRLEIDARLIKHLQAEEIERPTEIQERLIPAILRGKDVIGQSQTGTGKTLAFALPI
LSAIHPDDQCVQAVVTAPTRELAEQLYRVFNKCKKDSGMEEIRIRRVIGGTDKERNIAGL
QQPPHVVIATPGRLHDLVIKENALDVHQVRTLVVDEADQMLEMGFLEALDQVAARMPEAL
QMLVFSASIPQRLQPFLKKYMNQPRHVHVKPEQPSPKNLTHYLIPLRSRGRQQLAVEMAA
LLRPYLCLIFVNTKQEAEEVTDLFIAHGLQTECMHGDLSPRARKRSMRNIERAAVPYVIC
TDIAARGMDIKGVSHIINLQLPQDLQYYLHRAGRTARAGASGEVFTIVSKEDYPALHQLQ
KQSFIFRYLDIKKGEWLEIDQLGSGYAPGRQRFNPRKKQKNPSHKPKNGKPGYKKRRKRK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggtttagccgcctggaaattgatgctcgtttaatcaaacatttgcaagccgaa
gaaattgagcggccgacggagattcaagaacggcttattcctgctatattaagggggaaa
gacgtgattggacagtcgcaaacgggcaccggcaagacgcttgcgtttgccttgccgata
ttgtcggcgattcacccggatgaccaatgtgttcaagccgtggtgactgccccaacgaga
gaattggccgaacagctttatcgagtgtttaataaatgcaaaaaagacagtggcatggaa
gaaattcgtatccggcgagtcattggcgggacggataaagaacggaatattgccggtctt
caacaaccgccgcacgttgtcattgcaacgccggggcgattacacgatcttgtaataaag
gaaaacgccctagatgttcatcaagtacggacgcttgtcgttgatgaagcagaccaaatg
ttggaaatggggttcttggaagctttggaccaagtggccgcacgtatgccggaagcgttg
caaatgctcgtcttttccgccagcattccgcaacgcctccaaccctttttaaaaaaatac
atgaatcaaccgcgccatgtacatgtaaaaccggaacaaccgtctccgaaaaacctaact
cattatctgattccgttacgaagtcgcggacgtcaacaattggcggtggaaatggctgct
ctcttgcgtccgtatctatgcttgatttttgtgaacacgaaacaagaagcggaagaagta
acggatctttttattgcgcatggactccaaaccgagtgcatgcatggagacctctccccc
cgcgcccgtaaacgatcgatgcggaacattgaacgtgcggcggtcccatatgtgatttgt
accgatattgccgcccgcgggatggacattaaaggggtttctcacattattaatttgcaa
ctgccgcaggacttgcaatactatttgcaccgggcagggcggacggcgcgagcgggtgcc
tccggtgaagttttcacgattgtttccaaagaagattacccggcgcttcatcaattgcaa
aaacaaagcttcatcttccgatatttggatattaaaaaaggggaatggcttgaaattgat
caattgggcagtggttatgcaccgggaagacaacgtttcaatccccgaaaaaagcaaaaa
aatccatcccataagccgaaaaacggtaaacccggttacaaaaagaggaggaaaagaaaa
tga
DBGET
integrated database retrieval system
