Salicibibacter cibi: HUG20_08835
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Entry
HUG20_08835 CDS
T07369
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
scib
Salicibibacter cibi
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scib03400
]
HUG20_08835 (addB)
Enzymes [BR:
scib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUG20_08835 (addB)
DNA repair and recombination proteins [BR:
scib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HUG20_08835 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QQK79982
UniProt:
A0A7T7CFB6
LinkDB
All DBs
Position
1723710..1727144
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AA seq
1144 aa
AA seq
DB search
MQLRFYLGKSGSGKTTTLLNEVERALSEEAVDGSPILFLVPEQMTFQIEYQLTKQLGGMT
RAHVLSFSRLALRVLQETGGNTGDRLQRAGVHMLLRKIVEEEKKHFRVFRKAADTDGFIH
ELELMMTEMRRQALAPDVIADKQSQLEEDGKSAGLRDKLHDISLVYERFEQAFQGTYMNT
EEALKRLIRQLPDSEWLEGAIVYIDGFYDFSPQELYVIESLFAKAKEMTVALTIDHVPNQ
DRSPNELDRFYLTAKTYTKLTTLSMDHNIGWNVCMFSDKRPSVHEETPQLFEAVNRRAEV
EGVARKIIELVRDDGYKYGDIALLVRDDRPYDELLKRVFGRFEIPIFLDEKRSMMHHPVV
ELIRSTLEIVEKNWPFEAVFRALKTDLFFSPDDNWRDWREKVDELENYALAHGINGNKWR
EGQRWHYRRHRNVMDADGQTDMEKKIEDRLNNTRDALIAPLLTLETRLKQSESVRGRCEA
LYLFFEELQLPAKIERMRDQAITDGALESAAEHDQVWENVMDLLDQFVDAAGDDGLSLFY
FTRMIDAGLESMQFAIVPPAIDQVTIADMERSRLPDVRVTFILGANEGILPAKPEEEGLI
RDRERDQLETIGLSVGPSANDRLWNEPFYLYMAEASPADLLIYTYALADEDGKTLLPSPL
IGRLREQYPNIQQTFIEADAGSAQEDMQWTFINHPEQAIEELAMQLQKWRNGEEIPDVWG
HVYNWFTAKSEWQDRLRTVLGSLFYKNQAIRLDEGTTKELYGEDIQTSVSRMEMFQKCAF
RHFGTYGLGLKEREVFKLEAPDIGELFHAALKDVAEVVREQNLVWADLSDRECAHIARET
VEKLLPYVQRNIMFSTNRHAYISKKLEDVVVHTTKTLRTQAQSSSFVPIGLEVQFGNQKG
NIPTYEFRLKNGSNLSLRGRIDRVDHAKSESGDLLRVIDYKSSRQQWRLSDVFHGISLQM
PVYLDIILHSAKQWLGTDADIGGMFYFHVHNPVVEADESMDEAKIADKLLKQFKMQGMLP
ADENIATLMDQSLHEGGHSSIVPVYMKKDGAFSESKSSVVAKDDFQSLRRYLRTKMKEIG
EMMSDGKVGIDPYRTDKNEIACTYCPLQSVCQFDPTLPSNDYRLLSTLSDETTMENMKRE
EDES
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgcgtttttatctggggaaaagcggaagcggaaaaacgaccaccttattgaac
gaagtagaacgagcattatctgaagaagccgtcgacggttcgcctattctttttctcgtt
ccggaacaaatgacgtttcaaatcgaataccaattgacaaaacaactcggcgggatgacg
cgtgcccatgtgttaagtttttctcgtttggcgttgcgcgtcttacaagaaaccggaggg
aataccggcgaccgtttgcaacgggccggcgtccatatgctgcttcgcaaaatcgtcgaa
gaggagaaaaagcacttccgggtgtttagaaaagcagccgatacggacggctttattcat
gagctggaactaatgatgacggaaatgcgccggcaagcgttggcaccggatgtgattgcc
gacaagcaatcacaattagaagaagatggaaaatcggccgggctgcgtgataagcttcat
gatatttccctcgtttatgagcggtttgaacaggcctttcagggtacgtacatgaacacg
gaagaagcgctaaaacggctcatccgccaactgcctgattcggagtggctagagggcgcc
atcgtttacatcgatgggttttacgattttagcccgcaggagctgtatgtcattgagtcc
ctctttgccaaagcgaaggaaatgacggttgcccttaccatcgaccatgttcctaaccaa
gataggagtcccaatgagcttgatcgtttctatttgacggcaaaaacgtacacgaaactg
accaccctttccatggatcacaatattggttggaacgtttgtatgttttcagacaaacgc
ccaagtgttcacgaagagacccctcagttgtttgaagcggtaaaccggcgagcggaagtt
gaaggcgtagcgcgtaaaatcattgaacttgttcgtgatgatggatataaatacggggac
attgcccttctcgtgcgcgacgatcgaccatatgatgaattgttgaaacgtgtgtttggc
cgttttgaaattccgatttttttggatgaaaaaagatcaatgatgcatcacccggttgtg
gaacttattcgctccacgctcgaaattgttgaaaaaaattggccgtttgaagcggttttt
cgcgctttgaaaaccgacttatttttttcgcccgatgataattggagggattggcgcgag
aaagtcgatgaactggaaaactatgcgttggctcacggcattaacggaaataaatggaga
gaagggcaacgttggcattatcggcggcaccgaaatgtgatggatgccgatggacagacc
gacatggaaaaaaagattgaggaccgcctgaataacacacgagatgcgttgattgcgccg
ttactcacgttggaaacgcgtttgaaacaaagcgaaagcgtacgagggcgctgtgaagca
ttgtatctttttttcgaagaattgcagctgccggctaaaattgaacggatgcgagatcaa
gcgatcacggacggtgcgttggaaagtgccgccgagcatgatcaagtatgggaaaatgtg
atggatctgctcgatcaatttgtggatgcggccggcgatgacggtctatccctcttttac
tttacccgcatgatagacgccgggttggaaagcatgcagtttgcgatcgttcccccagcc
attgatcaagtaaccattgctgatatggagcgctctcgtctgccggatgtgcgtgtcacc
tttattctcggcgcgaatgagggcattctcccggccaaaccggaagaagaagggttgatc
cgtgaccgtgaacgtgaccagttggaaaccatcggcctgtctgttggaccttcggccaat
gaccgcctttggaacgaacccttttacttatatatggcggaagcaagcccggccgatttg
cttatttacacatacgcgcttgccgatgaggatggcaaaacattgcttccttccccactt
atcggacggttgcgggagcaatatccaaacatacagcaaacgtttattgaagcagatgcc
ggcagcgcacaggaagacatgcaatggacgtttatcaatcatccggaacaagcaatcgaa
gaattggccatgcaattgcagaaatggcggaacggtgaagagatccctgacgtttggggc
catgtctataattggtttacggcaaaatcagagtggcaggatcgtttgcgaaccgtgttg
ggaagtttattttacaaaaatcaagccattagattggatgaaggaacgacgaaggaactg
tacggagaagatatccaaacgagcgtcagccgtatggaaatgtttcaaaaatgtgcgttt
cggcattttggtacgtatggattaggtttaaaagagcgcgaggtttttaaattggaagcc
ccggatatcggagagctttttcatgctgcccttaaagatgtagcggaagttgtccgggaa
caaaaccttgtatgggcggatctatccgatcgtgagtgcgcgcatattgcccgcgaaacc
gtagaaaagctgttgccctacgttcaacgaaacattatgtttagcacgaatcgccatgcc
tatataagcaaaaaattggaggacgtcgttgtccatacgacaaagacattacgtacccag
gcgcaatcatcaagcttcgtccctattgggcttgaagtccaattcggaaatcaaaaagga
aatatccccacttatgaatttcggttaaaaaacgggagcaatctgtctttgcgcgggcgt
attgaccgcgtagatcatgctaaaagtgaaagcggtgacctgttgcgtgtgatcgactat
aaatcgagccggcagcaatggcgtttatcggatgtctttcatggcatttccctacaaatg
ccggtttatttggatatcattttgcatagcgccaaacaatggttgggtacagatgcggat
atcggagggatgttttatttccatgtccacaacccggtcgttgaagcggatgagagcatg
gatgaggctaagattgccgacaaacttttaaagcagtttaagatgcaagggatgttgcct
gcggatgaaaacattgccaccttaatggatcaatcccttcatgaaggcggccattcgtcc
attgttcccgtttacatgaaaaaggacggcgctttttccgaatctaaatcttccgtcgtc
gcaaaagatgatttccaatcattgagacggtatttgcgtaccaagatgaaagaaatcgga
gaaatgatgagcgacggtaaagtaggaatcgacccatatcgcaccgataaaaacgaaatc
gcttgtacgtactgcccacttcaatcagtttgccaatttgatccgacgcttccgagcaat
gactaccgattgctatccacgctttcggatgaaacaacgatggaaaatatgaagcgagag
gaggatgagtcttga
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