Salicibibacter cibi: HUG20_12015
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Entry
HUG20_12015 CDS
T07369
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
scib
Salicibibacter cibi
Pathway
scib02024
Quorum sensing
scib03060
Protein export
scib03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HUG20_12015 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HUG20_12015 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUG20_12015 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scib02044
]
HUG20_12015 (ffh)
Enzymes [BR:
scib01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HUG20_12015 (ffh)
Secretion system [BR:
scib02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HUG20_12015 (ffh)
Eukaryotic Sec-SRP protein
HUG20_12015 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
AAA_16
AAA_17
AAA_33
ResIII
CbiA
cobW
nSTAND3
APS_kinase
AAA_19
ATP_bind_1
NB-ARC
6PF2K
AAA_28
KTI12
NPHP3_N
Fe-ADH
NACHT
ATPase
AAA_14
AAA
AAA_7
Mg_chelatase
SWI2_SNF2
AAA_18
Thymidylate_kin
AAA_30
CLP1_P
AAA_5
YqeC
nSTAND_NTPase5
RNA_helicase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QQK80554
UniProt:
A0A7T7CFX8
LinkDB
All DBs
Position
complement(2394561..2395913)
Genome browser
AA seq
450 aa
AA seq
DB search
MAFEGLAERLQATMSKIKGKGKVNEADVKEMAREVRLALLEADVNFKVVKQFVNRIKERA
VGQEVMKSLTPGQQVIKVVNEELTELMGKEESKLEVADKAPTIVMMVGLQGSGKTTTAAK
LANHLRKEKNRNPMLVAADVYRPAAIDQLQTLGKQLEMPVFSKGTEANPVDIVREGVEQA
KAENHDYVLLDTAGRLHVDEALMDELQQMSDEIRPHEVLLVVDAMTGQDAVNVAEQFNEQ
LPVSGVILTKLDGDTRGGAALSIRAVTEQPIKFAGMGEKIDQLETFHPERMASRILGMGD
MLSLIEKAQTNVDEERAKELEKKMRNADLTFDDFLEQLEQVKSMGSLEDILSMMPGAGKM
KGMKNMQLDESQIGRVEAIVRSMTKAEKQDPKLMNASRKRRIAKGSGTSVQDVNKLLKQF
EDMKKMMKQMSSMGGGKKKGKGGMQLPFMR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgaaggtttagccgagcgtttgcaggcgacgatgtcgaagattaagggcaaa
gggaaagtcaatgaagcagacgtgaaagagatggcgcgggaagtccgcctggcgctcctt
gaagccgatgtgaacttcaaagtcgtcaaacagtttgtgaatcgcattaaagaacgcgcc
gtcggacaggaagtaatgaaaagcttaacccccggccagcaagtcataaaggttgtcaac
gaagaactgacagagctgatgggaaaagaagaaagcaaactggaggtcgccgataaagcg
ccaacgattgtcatgatggtcggtttgcaagggtccgggaaaacgacgaccgccgcgaaa
ctcgctaaccatttgcgcaaagagaaaaaccgaaacccgatgcttgttgctgctgacgtt
tatcgtcccgctgccatcgatcagttgcaaaccctcggaaagcaattggagatgcctgtt
ttttccaaaggaaccgaagccaatcccgttgacatcgtccgggaaggggtcgagcaggca
aaagcggagaatcatgactatgtgctccttgataccgccggccgtttgcatgtggatgaa
gcgctgatggacgagttgcaacaaatgagcgacgagatccggccccatgaagtcctcctc
gtcgtcgatgccatgaccggccaagatgccgttaatgttgcggaacaatttaacgagcaa
ttgcccgtttccggcgtcatcctcacgaaattggacggggatacccgcggcggtgccgcc
ctttccattcgcgccgtcaccgagcagccgatcaagtttgccgggatgggcgagaaaatc
gaccagttggaaacgttccatcccgaacgcatggcgtctcgaattctcggaatgggagat
atgctttcgcttatcgaaaaagcacaaacaaacgtagatgaagagcgtgccaaagagttg
gaaaagaaaatgcgcaacgccgatctcacgtttgacgattttctggaacagctggaacaa
gtgaaaagcatgggatcacttgaagacatccttagcatgatgcccggtgccggcaagatg
aaaggcatgaaaaacatgcagttggatgaaagccaaatcggtcgcgtcgaagcgatcgtg
cgctcgatgacgaaagcggaaaaacaagaccccaagttgatgaacgcgagccgcaaacgt
cggatcgcaaaggggagcggaacgtcggtgcaagacgtgaacaaattgctcaagcaattc
gaagacatgaaaaaaatgatgaaacaaatgtcgtcgatgggcggaggcaaaaagaaagga
aaaggcggcatgcaattgccgttcatgcgctga
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