Salicibibacter cibi: HUG20_12375
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Entry
HUG20_12375 CDS
T07369
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
scib
Salicibibacter cibi
Pathway
scib00550
Peptidoglycan biosynthesis
scib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUG20_12375
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scib01011
]
HUG20_12375
Peptidoglycan biosynthesis and degradation proteins [BR:
scib01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HUG20_12375
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QQK80614
UniProt:
A0A7T7CFZ8
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All DBs
Position
complement(2481890..2483818)
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AA seq
642 aa
AA seq
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MSKITRTLVRRRLLLALLAGIALTLLLMARLGYVQFSLGGWLTEEAEESWSRDLPFEAER
GEILDRHGEALATNVSAPSVLVVPRQIEDPVETSEQLADVLESDRQDVYEQITENSSMVR
LTPFGRKIDQERASEVREQRLPGVYIVEDNKRHYPNGEYLSHVLGFAGIDNQGLTGIEKQ
YDERLQGESGHVSFFSDAQGQRLPDMADQYQAPQNGMDVRLTIDDQVQTIIERELDNAEA
SYNPDGALAIAMDPDNGEILGMASRPHYNPDDYQAVSPEIYDQNRPIWSTYEPGSTFKII
TLAAALEENEVDLDEDTFNDPGYITVAGQRLNCWKKGGHGEQTYLEVVQNSCNPGFVSLG
EKLGTETLFDYIDQFGFGERTGIDLEGEGTGILFDVENVGPLERSTTAFGQGVSVTPIQQ
VAAVAAAVNGGTLYQPFIAKDWLDPDDGVVLDSQTPMEKQQVISEEASAEVRRALEHVVA
QGTGGGAFVDGYRVGGKTGTAQKAQGGRYLENNHIVSFIGFAPADDPEIVVYVAIDNPKE
TVQFGGVVAAPIVGNVIGDSLQAMGVPRREDQIEKELTWSDVPYLDVPDVTGLTLRELHD
ANYPLNLEISGEGEEIYRQSPAAGERVEEGSTLRLYMRDESD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaataacgagaacgctcgtgcgccgaaggttactcttggctttgctggctggg
atcgcgttaacgctgttgctcatggcaaggctcggctacgtacagttttcacttggcggt
tggttgacagaagaagctgaggaatcatggagcagggatttgccttttgaagcggagcgc
ggagagatattggatcgacatggcgaagcgttggcaacgaatgtcagtgcgccatcggtc
ctcgttgttccgagacagatcgaggacccggtggaaacatctgagcaactcgctgacgtt
ttggaaagtgatcggcaagatgtatatgagcaaatcacagagaacagctcgatggttcga
ttgacccctttcggacgcaagattgatcaagaacgcgcatcggaagtgcgggaacaacgt
ttgcccggcgtttacattgtcgaagataacaaacgccactatccgaacggcgaatacctt
tcccacgtgttgggatttgccggcattgataatcaaggacttacaggcatcgaaaaacaa
tacgatgaacgcttgcaaggcgaaagtggacacgtttcttttttctctgatgcccaaggg
caacggttgccggatatggccgatcaatatcaagccccgcaaaatggcatggatgtgcgg
ttaaccattgacgatcaagtgcaaacgattatcgaacgggagttggacaacgctgaggcc
tcgtacaatccggacggggcgcttgccattgccatggaccctgacaatggagaaatcctt
gggatggccagccggccacactataatccggatgattaccaagcggtttccccggagatt
tatgatcaaaaccgtccaatttggtctacgtatgaaccgggctctacgttcaagattatt
acccttgcggctgcccttgaagaaaacgaagtggatctcgacgaagatacatttaatgac
cccggatacattacagtagccggacaacgtttgaattgttggaaaaaaggcgggcatggc
gaacaaacgtatttggaagttgtgcaaaactcttgtaaccccggatttgtatcgttggga
gaaaagttgggaacagagacgttgtttgactatattgatcagtttggctttggggaacga
acaggcattgacttggaaggggaagggaccggcatcctattcgatgtagagaatgtgggg
ccgttggaacgttccacgacagcatttgggcagggcgtgtccgtgactccgatccaacaa
gtggccgccgttgccgcagcagtaaacggggggaccctttatcagccttttatcgctaaa
gattggctcgatcccgatgatggcgttgttctggacagccagactccaatggaaaaacag
caagtaatatccgaagaagcttcggctgaagtgcgacgggctttggaacatgtcgttgcg
caaggtaccggcgggggagcgttcgttgacggatatcgtgtcggcggaaagacaggaacc
gcccagaaagcgcaaggtgggcgttatttggaaaacaaccatatcgtttcgttcattggt
ttcgcgccggccgacgatcctgagatcgtcgtatatgtcgctatcgataatccgaaagaa
acggtacaattcggaggagtcgtagcagcgccgatcgtcggcaacgtcattggggacagt
ttgcaggcgatgggtgtgccgcggcgagaggatcaaatcgaaaaggaattaacttggtcc
gatgtcccttacttggacgtccctgatgtcacgggattgacattaagagaattgcatgat
gccaattatccactgaacctggaaatttcaggagaaggggaagaaatttaccgccaatcc
cccgctgcaggcgagagagtagaagaaggctccacgcttcgtctgtacatgagggacgaa
agcgattaa
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