Salicibibacter cibi: HUG20_12660
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Entry
HUG20_12660 CDS
T07369
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
scib
Salicibibacter cibi
Pathway
scib00010
Glycolysis / Gluconeogenesis
scib00020
Citrate cycle (TCA cycle)
scib00260
Glycine, serine and threonine metabolism
scib00280
Valine, leucine and isoleucine degradation
scib00310
Lysine degradation
scib00380
Tryptophan metabolism
scib00620
Pyruvate metabolism
scib00630
Glyoxylate and dicarboxylate metabolism
scib00640
Propanoate metabolism
scib00670
One carbon pool by folate
scib00785
Lipoic acid metabolism
scib01100
Metabolic pathways
scib01110
Biosynthesis of secondary metabolites
scib01120
Microbial metabolism in diverse environments
scib01200
Carbon metabolism
scib01210
2-Oxocarboxylic acid metabolism
scib01240
Biosynthesis of cofactors
Module
scib_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scib_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scib_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
scib_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
HUG20_12660 (lpdA)
00020 Citrate cycle (TCA cycle)
HUG20_12660 (lpdA)
00620 Pyruvate metabolism
HUG20_12660 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
HUG20_12660 (lpdA)
00640 Propanoate metabolism
HUG20_12660 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HUG20_12660 (lpdA)
00280 Valine, leucine and isoleucine degradation
HUG20_12660 (lpdA)
00310 Lysine degradation
HUG20_12660 (lpdA)
00380 Tryptophan metabolism
HUG20_12660 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HUG20_12660 (lpdA)
00670 One carbon pool by folate
HUG20_12660 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scib04147
]
HUG20_12660 (lpdA)
Enzymes [BR:
scib01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
HUG20_12660 (lpdA)
Exosome [BR:
scib04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
HUG20_12660 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
HI0933_like
FAD_oxidored
DAO
GIDA
NAD_binding_8
Lys_Orn_oxgnase
FAD_binding_3
Lycopene_cycl
3HCDH_N
AlaDh_PNT_C
UDPG_MGDP_dh_N
Amino_oxidase
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QQK80665
UniProt:
A0A7T6ZCB1
LinkDB
All DBs
Position
complement(2539998..2541407)
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AA seq
469 aa
AA seq
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MVVGDLAEEVDTIIIGSGPGGYVAAIRAAQLGQSVTLVEKGDVGGVCLNVGCIPSKALIE
AGHSYEKAQGNDELGIKSENVSVDFSKVQEWKSGVVQKLTGGVQSLLKGNKVNVVQGEAY
LSDKDTVRVSSENNSGQSYKFKNCIIATGSQPIELSNFKYSNRVIDSSGALALDAIPEKL
VVIGGGYIGIELAGAYASFGTEVTVLEGEKRILGGFEKQMSQLVQRRLKNKGVTFYTEAM
ASGVEEKDDGVTVTADVKGEEQKIDADYVLVSVGRKPNTEELGLEQIGVEMDDKGLIQTD
KEARTSVPNLFAIGDITDGPPLAHKASYEGKIAAEVISGEASAIDYLGIPLVAFSDPELA
SVGYTEEEAKEAGFEAKASKFPFQANGRALSLNDSDGFMKLVTRKDDGLVIGAQIAGPSA
SDMIAEVGLAIEAGMTAEDVAMTIHAHPTLGEITMEAAEVALGTPIHSM
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggttgtaggagatctggcagaagaagtggatacgattatcatcgggtccggtcccggg
ggatacgtggcggcgattcgtgccgcccaactcggacagtccgtcacccttgtagaaaaa
ggtgacgtgggaggcgtttgcctaaacgtcggctgcatcccgtcgaaagctttgattgaa
gccgggcacagttacgaaaaagcgcaaggaaatgatgagcttggcattaagtcagagaac
gtctccgttgacttttccaaagttcaagaatggaaaagcggggttgtccaaaaattaacg
ggcggtgtccaaagtctgttaaaaggaaacaaagtgaacgttgtgcagggggaagcttat
ctctccgacaaggacactgtgcgtgtctcaagtgagaataacagcgggcaatcatacaag
tttaaaaactgtatcattgccactggctctcagccaattgagctatccaattttaaatat
agcaatcgagtgatcgattcctcgggtgcgttggccttggacgctatcccggaaaagctc
gtcgtcatcggcggcggctatatcggcatagaattggcaggcgcttatgccagtttcgga
actgaagtcaccgtcctcgagggagaaaaacgcatcctcggcggatttgagaagcaaatg
tcccaactcgtacaacgccgattgaaaaataaaggcgtcacgttctacacagaagcgatg
gcaagcggtgtggaagaaaaagacgacggcgtgacggtgacggccgatgttaaaggcgaa
gaacaaaaaatcgatgctgattacgtactcgtaagcgttggacgtaaaccgaatacggag
gagcttggcctcgagcaaatcggtgttgaaatggatgataaaggcctcattcaaaccgat
aaggaagcacgcacgagcgtgccgaacctattcgcgatcggtgatattactgatggtccg
ccgcttgcgcacaaagcatcttatgaaggcaaaattgcagctgaagtcatttccggcgag
gcttctgccattgattatctcggcatccctctcgtcgccttctcggatccggagttggca
tccgtcggttacacggaagaggaagcaaaagaagcaggctttgaagcaaaagcatcgaag
tttccgttccaagccaacggacgggccctatccctcaatgattccgacgggtttatgaaa
cttgttacacgaaaggatgacggattggttatcggcgcccaaatcgccggccccagtgcc
tctgacatgatcgccgaagtcggacttgccattgaagccggcatgaccgcagaagatgtg
gcgatgaccattcatgcccacccgaccctcggagagattacgatggaagcagcggaggta
gcgttaggaacgcccatccattcgatgtaa
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