KEGG   Salicibibacter cibi: HUG20_12660
Entry
HUG20_12660       CDS       T07369                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
scib  Salicibibacter cibi
Pathway
scib00010  Glycolysis / Gluconeogenesis
scib00020  Citrate cycle (TCA cycle)
scib00260  Glycine, serine and threonine metabolism
scib00280  Valine, leucine and isoleucine degradation
scib00310  Lysine degradation
scib00380  Tryptophan metabolism
scib00620  Pyruvate metabolism
scib00630  Glyoxylate and dicarboxylate metabolism
scib00640  Propanoate metabolism
scib00670  One carbon pool by folate
scib00785  Lipoic acid metabolism
scib01100  Metabolic pathways
scib01110  Biosynthesis of secondary metabolites
scib01120  Microbial metabolism in diverse environments
scib01200  Carbon metabolism
scib01210  2-Oxocarboxylic acid metabolism
scib01240  Biosynthesis of cofactors
Module
scib_M00009  Citrate cycle (TCA cycle, Krebs cycle)
scib_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scib_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
scib_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:scib00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HUG20_12660 (lpdA)
   00020 Citrate cycle (TCA cycle)
    HUG20_12660 (lpdA)
   00620 Pyruvate metabolism
    HUG20_12660 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    HUG20_12660 (lpdA)
   00640 Propanoate metabolism
    HUG20_12660 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HUG20_12660 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    HUG20_12660 (lpdA)
   00310 Lysine degradation
    HUG20_12660 (lpdA)
   00380 Tryptophan metabolism
    HUG20_12660 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HUG20_12660 (lpdA)
   00670 One carbon pool by folate
    HUG20_12660 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scib04147]
    HUG20_12660 (lpdA)
Enzymes [BR:scib01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HUG20_12660 (lpdA)
Exosome [BR:scib04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HUG20_12660 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 HI0933_like FAD_oxidored DAO GIDA NAD_binding_8 Lys_Orn_oxgnase FAD_binding_3 Lycopene_cycl 3HCDH_N AlaDh_PNT_C UDPG_MGDP_dh_N Amino_oxidase NAD_binding_7
Other DBs
NCBI-ProteinID: QQK80665
UniProt: A0A7T6ZCB1
LinkDB
Position
complement(2539998..2541407)
AA seq 469 aa
MVVGDLAEEVDTIIIGSGPGGYVAAIRAAQLGQSVTLVEKGDVGGVCLNVGCIPSKALIE
AGHSYEKAQGNDELGIKSENVSVDFSKVQEWKSGVVQKLTGGVQSLLKGNKVNVVQGEAY
LSDKDTVRVSSENNSGQSYKFKNCIIATGSQPIELSNFKYSNRVIDSSGALALDAIPEKL
VVIGGGYIGIELAGAYASFGTEVTVLEGEKRILGGFEKQMSQLVQRRLKNKGVTFYTEAM
ASGVEEKDDGVTVTADVKGEEQKIDADYVLVSVGRKPNTEELGLEQIGVEMDDKGLIQTD
KEARTSVPNLFAIGDITDGPPLAHKASYEGKIAAEVISGEASAIDYLGIPLVAFSDPELA
SVGYTEEEAKEAGFEAKASKFPFQANGRALSLNDSDGFMKLVTRKDDGLVIGAQIAGPSA
SDMIAEVGLAIEAGMTAEDVAMTIHAHPTLGEITMEAAEVALGTPIHSM
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggttgtaggagatctggcagaagaagtggatacgattatcatcgggtccggtcccggg
ggatacgtggcggcgattcgtgccgcccaactcggacagtccgtcacccttgtagaaaaa
ggtgacgtgggaggcgtttgcctaaacgtcggctgcatcccgtcgaaagctttgattgaa
gccgggcacagttacgaaaaagcgcaaggaaatgatgagcttggcattaagtcagagaac
gtctccgttgacttttccaaagttcaagaatggaaaagcggggttgtccaaaaattaacg
ggcggtgtccaaagtctgttaaaaggaaacaaagtgaacgttgtgcagggggaagcttat
ctctccgacaaggacactgtgcgtgtctcaagtgagaataacagcgggcaatcatacaag
tttaaaaactgtatcattgccactggctctcagccaattgagctatccaattttaaatat
agcaatcgagtgatcgattcctcgggtgcgttggccttggacgctatcccggaaaagctc
gtcgtcatcggcggcggctatatcggcatagaattggcaggcgcttatgccagtttcgga
actgaagtcaccgtcctcgagggagaaaaacgcatcctcggcggatttgagaagcaaatg
tcccaactcgtacaacgccgattgaaaaataaaggcgtcacgttctacacagaagcgatg
gcaagcggtgtggaagaaaaagacgacggcgtgacggtgacggccgatgttaaaggcgaa
gaacaaaaaatcgatgctgattacgtactcgtaagcgttggacgtaaaccgaatacggag
gagcttggcctcgagcaaatcggtgttgaaatggatgataaaggcctcattcaaaccgat
aaggaagcacgcacgagcgtgccgaacctattcgcgatcggtgatattactgatggtccg
ccgcttgcgcacaaagcatcttatgaaggcaaaattgcagctgaagtcatttccggcgag
gcttctgccattgattatctcggcatccctctcgtcgccttctcggatccggagttggca
tccgtcggttacacggaagaggaagcaaaagaagcaggctttgaagcaaaagcatcgaag
tttccgttccaagccaacggacgggccctatccctcaatgattccgacgggtttatgaaa
cttgttacacgaaaggatgacggattggttatcggcgcccaaatcgccggccccagtgcc
tctgacatgatcgccgaagtcggacttgccattgaagccggcatgaccgcagaagatgtg
gcgatgaccattcatgcccacccgaccctcggagagattacgatggaagcagcggaggta
gcgttaggaacgcccatccattcgatgtaa

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