Salicibibacter cibi: HUG20_14485
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Entry
HUG20_14485 CDS
T07369
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
scib
Salicibibacter cibi
Pathway
scib00020
Citrate cycle (TCA cycle)
scib00190
Oxidative phosphorylation
scib00650
Butanoate metabolism
scib00720
Other carbon fixation pathways
scib01100
Metabolic pathways
scib01110
Biosynthesis of secondary metabolites
scib01120
Microbial metabolism in diverse environments
scib01200
Carbon metabolism
Module
scib_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scib_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scib_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HUG20_14485 (sdhB)
00650 Butanoate metabolism
HUG20_14485 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
HUG20_14485 (sdhB)
00720 Other carbon fixation pathways
HUG20_14485 (sdhB)
Enzymes [BR:
scib01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HUG20_14485 (sdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_2
Fer4
Fer4_13
Fer4_4
Fer4_21
Fer2_4
Fer4_3
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
QQK80981
UniProt:
A0A7T6ZDD3
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Position
complement(2910784..2911542)
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AA seq
252 aa
AA seq
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MSDQQTIRFVITRQDSPDDQSYNEEFEIQYKPNMNVISALMEIRRNPVTSDGKESKPVVW
DMNCLEEVCGACSMIINGKPQQSCTALIDDFEQPIRLEPMKTFPVVRDLIVDRSRMFDSL
KKVKAWIPIDGTYDLGPGPRIAENRRQWAYELSKCMTCGVCLEACPNVNSNSEFIGPAAV
SQVRLFNAHPTGEMNEPDRLNALMEEGGLQNCGNSQNCVESCPKGIPLTTSIAALNRDQT
LQAFKNFFGGGQ
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaacaaacgattcgctttgtcatcactcgtcaagacagcccggatgatcaa
tcctataacgaagaatttgaaattcaatataaaccgaatatgaatgtgatcagcgcgcta
atggagattcgccgtaatcctgttacctccgacgggaaagaatcaaaacctgtcgtttgg
gacatgaattgtttggaagaagtgtgcggtgcttgctcgatgatcatcaatgggaagcct
caacaatcttgtacagcgcttatcgatgattttgagcaaccgattcgtctggaaccgatg
aaaacttttccggtcgttcgggatctcatcgttgatcgtagtcgtatgttcgattccttg
aagaaagtaaaagcttggattccgattgacggcacttatgaccttggacctgggcctcga
attgccgaaaaccgacgtcaatgggcatatgaattatccaaatgtatgacatgcggcgtt
tgtctggaagcttgtccgaatgtcaatagcaactctgaattcattgggccggcggctgtt
tcacaagttcgtctctttaatgcccacccgacaggtgaaatgaacgagccggaccgcttg
aatgccttgatggaagaaggcggtttgcagaactgcggcaactcccaaaactgtgtggag
tcttgtccgaaaggcattccgctcacgacatccattgcagcactaaaccgggatcaaacg
ttgcaggcatttaagaactttttcggaggcgggcagtaa
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