Salicibibacter cibi: HUG20_14990
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Entry
HUG20_14990 CDS
T07369
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scib
Salicibibacter cibi
Pathway
scib03030
DNA replication
scib03410
Base excision repair
scib03420
Nucleotide excision repair
scib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUG20_14990 (polA)
03410 Base excision repair
HUG20_14990 (polA)
03420 Nucleotide excision repair
HUG20_14990 (polA)
03440 Homologous recombination
HUG20_14990 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scib03032
]
HUG20_14990 (polA)
03400 DNA repair and recombination proteins [BR:
scib03400
]
HUG20_14990 (polA)
Enzymes [BR:
scib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUG20_14990 (polA)
DNA replication proteins [BR:
scib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HUG20_14990 (polA)
DNA repair and recombination proteins [BR:
scib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HUG20_14990 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUG20_14990 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QQK81074
UniProt:
A0A7T7CGJ3
LinkDB
All DBs
Position
complement(3022310..3024943)
Genome browser
AA seq
877 aa
AA seq
DB search
MNKLVLVDGNSVAYRAFYALPLLSNDKGVYTNAVYGFTTMLLKILEEEQPTHMLIAFDAG
KTTFRHEQFEEYKSDRQKTPPELSEQLPIIQEVLQSFTINAVQVELYEADDIIGTLAKRA
EDENWQVRIYTGDKDLLQLVTDRTHVAITKKGITNVDWYDTDAIAERYGIPATHIPDMKG
LGGDSSDNIPGVPKIGEKTALKLLAEYGNIEDVLDHADDVSGPKMRDRLKEYRDQALMSK
QLAVINREAPVDLGLERLSYEGYDSKAVRQLFKEYGFNSLMNQITTDEDIKEEEAALEDF
EFRHMEEVTDEMLTSPAGLIVEVPVENYHNADIWGVSIVNENGSFTVPAEIALATDAFRD
WLSDEKKKKYVFDAKRVIVALGWKDITIKAVSFDALIASYLLDPSLSAHDIADIAERRGL
HTVLADESVYGKGAKFAKPEAAALNDHLARKAATLWKVKEALSSELEENEQSGLFSTMEL
PLSLVLAQMELQGVMTDQQQLLDMGKELDERLQSLEQDIHSLAGETFNINSPKQLGPILF
EKLELPVIKKTKTGYSTAADVLEKLVGEHEIIPKLLHYRQVMKLKSTYIDGLLKVIHADT
HKIHTRFNQAITQTGRLSSAEPNLQNIPIRLEEGRKIRKAFVPSESGWVILAADYSQIEL
RVLAHMSGDEKLKAAFHEGQDIHTKTAMDVFDVGNEEITDTMRRQAKAVNFGIVYGISDY
GLSQNLGITRKEAQSFIDRYFESYPNVKKYMDEAVLHARDEGYVTTLLNRRRYLPEINDR
NFNRRSFSERTAMNTPIQGTAADIIKKAMVDVADDLTRQRLQSRLLLQVHDELIFEVPPT
EIEQMQTFVTETMTETIALDVPLVVDVAHGQTWYEAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactcgtgcttgtagacggaaatagcgtggcataccgcgctttttatgccctg
cccctcttatcgaacgataaaggggtctacactaacgccgtctatggttttacaacgatg
ctacttaaaattttggaagaagaacaaccgacgcacatgcttatcgcttttgatgccggg
aaaacaacttttaggcatgagcaatttgaagagtataagagtgaccgtcagaaaacgccg
ccggagctttcggaacaactaccgattattcaggaagttttacagtcgtttaccattaac
gccgttcaggtcgagttatatgaagccgatgatattatcgggacgcttgccaaacgtgct
gaagacgagaactggcaggttcgcatctacaccggagataaggacttgcttcagcttgtg
accgatcggacacacgtcgcgattacgaaaaagggcattacgaatgttgattggtatgac
actgacgcaatcgctgaaaggtatggcataccggccacacacattcctgacatgaaaggg
ctcggcggggattcatcggataacattccgggggttcccaaaatcggtgaaaaaacggca
cttaaattattggctgaatatggcaatattgaagacgttctggaccatgctgatgatgta
tctggcccgaaaatgagggatcgcctgaaagaataccgggatcaagcccttatgagtaaa
caattggcagtcattaaccgggaagcaccggttgatcttgggttggaacgtctttcctat
gagggatatgatagcaaagccgtacggcagctttttaaagaatacgggttcaattcttta
atgaaccaaattacaaccgacgaagacataaaggaagaggaagcggcacttgaagatttt
gagtttcggcatatggaagaagtgacagacgaaatgctcacgtcaccagcgggtcttatt
gtcgaagtgccggtagagaattaccacaatgccgatatttggggcgtcagcattgtaaat
gagaacggatcgttcaccgtccccgcggagatcgcgctcgcaacggatgcttttcgcgat
tggttatccgatgaaaaaaagaaaaagtacgtatttgacgccaagcgcgtcatcgtggct
ttgggatggaaggacatcacgatcaaagccgtttcttttgatgccctcattgcatcatat
ctcctggacccttctttatcggcgcacgacatagcggatattgctgagcgacggggatta
cacacggttttagcggatgaaagcgtgtatgggaaaggtgcgaagtttgcgaagcccgaa
gctgcggcacttaatgaccacctggctcgcaaagcggctacgctctggaaggtgaaggaa
gcccttagttccgagttggaagaaaatgaacaaagcggtctgttttcaacgatggagctt
cctttatcattggtgcttgcgcagatggaactgcaaggagttatgacggatcaacaacag
ttgcttgatatgggcaaggagcttgacgaacgtctgcagtcgctcgaacaagatattcat
tcccttgccggtgaaacgttcaatattaattccccgaaacagttgggaccgattcttttt
gagaagcttgaacttccggtaatcaaaaaaacaaaaaccgggtactctactgccgctgat
gttcttgaaaaacttgtgggagagcatgaaatcattccgaaactgctgcactaccggcaa
gtgatgaagctcaaatcgacgtatatcgatggacttctcaaagtcattcatgcagatacg
cacaaaatccatacgcgttttaaccaagcgatcacacaaacgggccgtttgagttctgct
gaaccgaatttgcaaaacatcccgattcgccttgaagaaggaagaaaaatacgcaaagct
tttgttccttcagaatccggctgggttattttagccgccgattattcacaaattgaattg
cgtgtgcttgcccatatgtccggagatgaaaaattaaaagcggcttttcacgaaggacaa
gatatccatacgaaaacagcgatggatgtgtttgacgttggaaatgaagaaattaccgat
acgatgcggcgtcaggcaaaagcggtgaacttcggaattgtctacggcattagcgattat
ggactatcccaaaatctcgggatcacaagaaaagaagcacaatcatttatcgaccgttat
tttgaaagttatccgaatgtgaagaaatacatggacgaagcggtgctccatgcccgggat
gagggctacgtcacgactctgttaaatcgccgccgttatctccccgagattaacgaccgt
aattttaaccgcagaagtttctcggaacgaacagcgatgaatacacccattcagggaacg
gctgccgatattattaaaaaagcgatggttgatgtagcagatgatttgacgagacaaaga
ttgcaaagtcgcctactgttacaagttcatgacgagctgatttttgaggtccccccgaca
gaaatcgaacaaatgcaaaccttcgttaccgagacgatgacggaaacaattgccctcgat
gtgccgctcgttgtcgatgtagcgcacggacaaacatggtacgaagcgaagtga
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