Salicibibacter cibi: HUG20_16580
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Entry
HUG20_16580 CDS
T07369
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K26992
RNA polymerase sigma-O factor
Organism
scib
Salicibibacter cibi
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scib03021
]
HUG20_16580
Transcription machinery [BR:
scib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUG20_16580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
CENP-B_N
HTH_38
GerE
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QQK81362
UniProt:
A0A7T7CGN2
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All DBs
Position
3334400..3335002
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AA seq
200 aa
AA seq
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MNHDTIEQLKKECPRMAIFFDNNPQLAKQQIFQGFLEYDEYQHIFIQAVCFPNHGAFRAL
NEAFKDHYANVQFTYYLTKTLYWTSVQYDQRRREQRDNQRLMMDNLHETGTIWYPCENMP
DIITETSDLGTWSEDVELTNALRQLTAKQQIVIIERYGYERTNNEIARLLNVSPQAISRT
HSHALKRLRTILQRKWENDA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgacacgatagagcaactcaaaaaagaatgccctcggatggccatatttttc
gacaacaatcctcaactggccaaacagcaaatctttcaaggttttcttgaatacgatgaa
tatcagcacattttcatacaagcggtttgttttcccaatcacggtgcattccgggcactg
aacgaagcattcaaggaccattatgcgaatgtgcagtttacgtactatttaacaaaaaca
ctgtattggacttccgtccaatatgaccaacgccgacgggaacaaagggataaccagcgt
ctcatgatggacaacctccacgaaaccggaaccatttggtatccatgtgaaaatatgccc
gatatcatcaccgaaacgagcgaccttggcacatggagtgaagacgttgaactgacgaac
gcattgcgccaattaacagctaaacaacaaatcgttattattgaacgatatggctacgag
cgaacaaacaatgaaatcgcgcgcttattgaacgtaagcccgcaagccatttcccgaacg
cattcgcacgcgcttaaacgtcttcgcactattttgcaaaggaagtgggaaaatgatgct
tga
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