Salicibibacter cibi: HUG20_16895
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Entry
HUG20_16895 CDS
T07369
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
scib
Salicibibacter cibi
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scib03000
]
HUG20_16895
Transcription factors [BR:
scib03000
]
Prokaryotic type
Helix-turn-helix
Other families
HUG20_16895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
Mg_chelatase
AAA_5
PAS_4
Diguanyl_cycl_sensor
AAA_2
PAS
AAA
Tenui_NS3
HTH_30
HTH_29
NB-ARC
AAA_7
AAA_14
AAA_3
HTH_7
AAA_16
HTH_17
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QQK81420
UniProt:
A0A7T6ZDA9
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All DBs
Position
3395529..3397385
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AA seq
618 aa
AA seq
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MGSIYDKDRQLEISWERSQSYGVDPSYVDNDLLTGGELKDRKERLQELFQACSPILEQLY
SQLKHSLFTIIVADPDGYIVFNRGDSPFLQRAKKVWLDAGANWSENVKGTNAIGTAIYEN
RSVSVVGMQHFTQENHFLTCYSSPLYSPAGELLGILDVSGDARRHHPHTFGMVVAAAQAC
QSQLLFHGAKKELTLAIQETETVSQKLNQPLISIDQNAIIQQLNQKAAQILKQPINECIG
KSLSHWFDHHSIDHLLTTQDSKSNIRMKANSNIWMTEAIKDDRQKLFRSILSLPTKSHNP
TENDPAQTTWECDKAQRVLQFARHTSKTDTTMLIQGETGTGKDVIAQDIHHTSEREGDFI
PVNCAAIPESLIESELFGFQKGTFTGANQKGNIGKIKAAHKGTLFLDEIGEMPLSMQTVL
LRLLDNKHITPLGSHHPEPVDVRILAATNRDLTNDINENRFRKDLYYRLSALTIKLPPLR
NRTDVLTLANHFLEKMSLELNVKQFYVDDPTRKQIMDHQWPGNIRELQHTLRQAVYQAYF
MRESTHIKKEDLQLNEQQSQDDANGTEHERIAAVINETNGNLSRAAKLLGIGRTTLYRKI
SLYPQLHQRISQMRRGSL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgatatatgataaagaccggcaactggaaatttcctgggagcgaagtcaaagt
tatggtgtagatccatcatatgttgataacgaccttctaaccggtggagagcttaaggat
cgcaaagaaaggcttcaagaactatttcaagcatgctcaccaattttggaacagttatac
tcccaattaaaacattctctgtttacgattattgtggctgatccggatggttatatcgta
tttaaccgtggagattcgccttttttgcaacgcgctaaaaaagtatggttggatgcagga
gcaaattggagtgaaaatgtgaaagggacaaatgccatcggtacggctatttacgaaaat
cgatccgtaagtgttgtcgggatgcagcatttcacccaagaaaatcattttttgacctgc
tattcttctcctttatattcccctgcaggagaattattagggattctcgacgtaagcggt
gacgcaagacgacaccacccccatacctttggaatggttgttgcggctgcccaggcatgt
caatcacaacttctgtttcatggcgcaaagaaagaattaaccctagcgatacaggaaaca
gaaacagtatcccaaaaactgaatcaaccccttatttccattgatcaaaacgctatcatc
caacaactgaatcaaaaagctgctcaaatcctcaagcaaccaataaatgagtgcatcggc
aaatctctatcccactggtttgatcatcactcgatcgaccaccttttgactacgcaagat
tctaaaagcaacatccgcatgaaagctaactcaaatatttggatgacggaagcaatcaaa
gatgataggcaaaaattgttccgttctattttaagtctcccgacaaaaagtcataacccg
acagagaacgatccagcgcaaacgacatgggaatgtgataaagcccaacgtgttctgcaa
tttgcccgtcatacatccaaaaccgacaccacaatgcttatacagggagaaaccggaacg
ggaaaagatgttatcgctcaagacatccatcatacgagtgaaagagagggagattttatc
ccagtcaattgtgcagcaatcccggaatcactcatcgaatctgaattgtttgggtttcaa
aaaggaacttttacaggtgcgaaccaaaaaggaaacatcggcaaaatcaaggcagcccac
aaggggacgctattccttgatgaaatcggtgaaatgcctttatccatgcagaccgtactg
cttagattgctagataataaacacatcacacccttagggtcccatcatccggaacccgtc
gatgtacgaatacttgcagcgaccaatcgcgatttaaccaatgacatcaatgaaaatcgt
tttcgcaaagatttgtattatcgtttatccgcccttacgattaaacttccgccgttgcgc
aatcgcacagacgtattaacccttgcaaatcactttcttgaaaaaatgtcgctagagcta
aatgtcaaacaattttatgtggatgatcccacgcgaaagcaaatcatggatcatcaatgg
ccgggaaatatacgtgaacttcaacacacacttcgacaagcggtttaccaagcttatttt
atgagagaatcaacacacatcaaaaaggaagatttacaacttaatgaacaacaatcgcaa
gacgatgcaaatgggactgaacacgaacgaattgctgctgtaataaacgaaaccaacggt
aatttgtcacgagcagcaaaactccttgggattggaaggacaaccttatatcgaaaaatc
agcctttatcctcagcttcatcaacgaatttcacaaatgagaagaggatccctctga
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