Salicibibacter cibi: HUG20_18065
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Entry
HUG20_18065 CDS
T07369
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
scib
Salicibibacter cibi
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scib03000
]
HUG20_18065
Transcription factors [BR:
scib03000
]
Prokaryotic type
Helix-turn-helix
XRE family
HUG20_18065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_19
HTH_31
HTH_26
Phage_CI_repr
HTH_25
KorB
HTH_37
HVO_2718
HTH_38
ElaD-SseL-like_C
MarR
Sigma70_r4
HTH_20
TetR_N
DUF1611_N
BRR2_plug
Rrf2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QQK81632
UniProt:
A0A7T7CGX3
LinkDB
All DBs
Position
complement(3620573..3620905)
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AA seq
110 aa
AA seq
DB search
MIGERIQQLRTEKGFSLSELAERAGVAKSYLSTIERDLQKNPSIQFLGKVAEVLDVSIDY
LLHEGGNQDDRELDPEWQKLIEEAMDAGVSKEQFREFLNFNKWRMSNSDQ
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
gtgattggagaacgcattcaacagctccgtactgaaaaaggtttttcattgtcagagtta
gccgagcgtgcaggtgtagctaaatcttatttaagtacgattgagcgggatttgcaaaaa
aatccgtctattcaatttttaggaaaagttgccgaggtgcttgacgtatccattgattat
cttttgcatgagggagggaatcaggatgatcgtgaacttgatcccgaatggcaaaagctt
attgaagaagcgatggacgcaggggtaagcaaagagcaatttcgagaatttttgaacttc
aataaatggcgaatgagcaactcggatcaataa
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