Salicibibacter cibi: HUG20_18215
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Entry
HUG20_18215 CDS
T07369
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
scib
Salicibibacter cibi
Pathway
scib00260
Glycine, serine and threonine metabolism
scib00460
Cyanoamino acid metabolism
scib00630
Glyoxylate and dicarboxylate metabolism
scib00670
One carbon pool by folate
scib00680
Methane metabolism
scib01100
Metabolic pathways
scib01110
Biosynthesis of secondary metabolites
scib01120
Microbial metabolism in diverse environments
scib01200
Carbon metabolism
scib01230
Biosynthesis of amino acids
scib01240
Biosynthesis of cofactors
scib04981
Folate transport and metabolism
Module
scib_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HUG20_18215
09102 Energy metabolism
00680 Methane metabolism
HUG20_18215
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HUG20_18215
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HUG20_18215
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HUG20_18215
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HUG20_18215
Enzymes [BR:
scib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HUG20_18215
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QQK81656
UniProt:
A0A7T6ZEK4
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All DBs
Position
complement(3649423..3650658)
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AA seq
411 aa
AA seq
DB search
MKNIQQQDPEIFAAIEDEQSRQKNKIELIASENFTSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCEYVDVAENLARDRAKELFGAEHVNVQPHSGAQANMAVYSAILEHGDKVLGMNLSHG
GHLTHGSPVNFSGIQYNFIDYGVNEDDQRINYDKVLETAREHSPKLIVAGASAYPREIDF
KKFREIADDVGAYLMVDMAHIAGLVAAGKHQSPVPHAQFVTTTTHKTLRGPRGGLILCEE
TFAKKIDKMVFPGMQGGPLMHVIAAKAVSFKEALEPSFATYADQIIKNAKRLGVALQNEG
INLVSGGTDNHLLLLDLQSLNLTGKVAEKALDDVGLTANKNGVPFDPESPFVTSGIRLGT
AAVTTRGFQEEDMDEIGALFGLVLKNMDDDAKQKEARDRVSALTNKYPLYA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatattcagcaacaagatccggaaattttcgccgccattgaagatgaacaatct
cggcaaaaaaataaaatcgaattgattgcttccgaaaattttacaagcgaagcagtcatg
gaagcccaaggttcggttttgacgaataaatacgcggagggttatccggggcgccgttat
tatggcggctgtgaatatgtggacgtggcggagaatttggcacgggaccgggcaaaagag
cttttcggtgctgaacatgtcaatgtccaacctcattccggtgcccaggcgaacatggcc
gtttattctgccattttggaacacggggacaaagtgcttggcatgaatttatcccatggc
ggacatcttacacatgggagtccggttaactttagcggcattcaatacaattttatcgac
tacggcgtgaatgaagacgatcagcgcatcaattatgataaagtattggagacggcccgt
gaacattcgccaaaattaatcgtcgccggcgcttctgcatatcctcgggaaattgacttt
aagaaattccgggaaatcgcagacgatgtaggtgcgtatctcatggttgatatggcacat
attgcaggtttggtcgctgcaggtaagcatcagagccctgttcctcacgcccaattcgtt
acaacgacaactcataaaacattgcgtggccctcggggcggcttaattctttgtgaggaa
acatttgcgaagaaaatcgacaagatggtatttccgggaatgcagggcggtccgctcatg
catgtgattgctgccaaagcagtttcttttaaagaagcgctagagccttcttttgccacg
tatgcagatcaaattataaaaaatgccaaacgtctaggcgttgccttgcaaaacgaaggc
atcaaccttgtttccggcggtaccgataatcacctgttgctcttggacttgcaaagcttg
aatctgaccggaaaagtagctgaaaaagcattggatgatgtaggtttgaccgcgaataag
aacggggtacctttcgatcctgaaagcccgtttgtcacgagcggcattcgactcggcaca
gcagcggtcacgacacgtggctttcaagaagaggatatggatgaaatcggcgcgttgttt
ggcttagtgttaaaaaatatggatgatgacgcgaagcaaaaagaagcgcgtgatcgcgtg
agcgccttgacgaataagtatccattgtatgcataa
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