Salicibibacter cibi: HUG20_18315
Help
Entry
HUG20_18315 CDS
T07369
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
scib
Salicibibacter cibi
Pathway
scib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HUG20_18315 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scib03021
]
HUG20_18315 (rpoE)
03400 DNA repair and recombination proteins [BR:
scib03400
]
HUG20_18315 (rpoE)
Transcription machinery [BR:
scib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HUG20_18315 (rpoE)
DNA repair and recombination proteins [BR:
scib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HUG20_18315 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
QQK81675
UniProt:
A0A7T6ZDT0
LinkDB
All DBs
Position
complement(3669679..3670161)
Genome browser
AA seq
160 aa
AA seq
DB search
MTTRELDQDEVLEKSAVELAYKLLKEKREPVHYKDLFAEIADIKQLKKEQLDDRRTKLFT
DLNIGGSFVHLGANHWGLKAWYPVDQSEEDLSRTIQASSKSPDDQGSEHQDDDLEDLKDE
LDELASEDDADNSDKEELDGFGNDGQPEEKQDKEDKEDDQ
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
gtgacgactcgtgaactcgatcaggatgaagtattggaaaagtcagcggttgagcttgct
tacaaattattaaaggagaaacgtgaacctgttcactataaagacttgttcgcggagatt
gctgatatcaagcaattaaagaaggaacaattggatgatcgccggacgaaattattcacg
gatttaaatattggcggtagttttgttcacttaggggcaaaccattggggtttgaaagca
tggtatcctgttgatcaatcagaggaggatttgagccggaccatccaagcctcatcgaaa
agtccggacgatcaaggatcggaacatcaggacgatgatctggaagatttgaaagatgag
cttgacgaattggccagtgaagatgatgccgacaactcagataaagaagaactcgatggg
tttggcaatgatggccagcctgaagaaaagcaagataaggaagataaggaagatgatcaa
taa
DBGET
integrated database retrieval system
