Salicibibacter cibi: HUG20_18615
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Entry
HUG20_18615 CDS
T07369
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
scib
Salicibibacter cibi
Pathway
scib00550
Peptidoglycan biosynthesis
scib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUG20_18615
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scib01003
]
HUG20_18615
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scib01011
]
HUG20_18615
Enzymes [BR:
scib01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HUG20_18615
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HUG20_18615
Glycosyltransferases [BR:
scib01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HUG20_18615
Peptidoglycan biosynthesis and degradation proteins [BR:
scib01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
HUG20_18615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
FtsA_C
Motif
Other DBs
NCBI-ProteinID:
QQK81728
UniProt:
A0A7T6ZDW3
LinkDB
All DBs
Position
3726595..3728688
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AA seq
697 aa
AA seq
DB search
MQTATRRQYKRKKSKFHVLFRLTIGMGVLGAFGLLVIFGIAYALGPPPMELSQSTTIYSS
DDEVINEQHQGQEREWTDLEDVSPHLVDAFIAVEDRKFFDHHGFDYTRIGAAVLNNIQAT
SMSQGASTITQQYARNLFLNHDKTWDRKIREALYALRLEWHVPKEDILEGYVNTINFGHG
AYGIEQAAQMYFNTSASDLNAAQSALLAGLPRGPSYYSPYVYPDRAENRQQMILEMMHEQ
GTLETAEYEEALDETMTYEAAEEEALETTAPYFQDTVEQELVDRYDLDPDVLEAGGLNIY
TTIDPDMQESTERYVEAELPTNDPLQGAAVSIDPRTGDVKAMVGGKNYSESPFNRAVDAH
RPPGSAFKPFLYYAALENGFTAATPLKSEPTSFPNPHGDSRYEPGNFNEVYADDFITLAQ
AMAYSDNIYAVKTNVFQEPESLVETAKAAGIESPLSANLSLALGTSEVNVLELTKGYSPF
ANGGEQVEHRLIERVEDHEGNVLLETEPEKQQVFEPELAYIATDLMKQTFDPSMNDYAAV
TGHSIAHLLQRPAAGKSGSTPSDSWMVGFTPELVTGVWVGYDDNTELDHGEHGQIAKRIW
VNALESGLDGHLKQDFSTPDGVEEVDIDLETGLLADDACGPSYTVSFLEDTAPKESCVTY
LDDEEAEEEAREERNNKESEKLMDKLKRWFGSDEAEM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacagcaacgaggcgtcaatataaaaggaaaaagagcaaatttcatgtacttttt
cggctaacgattgggatgggggtccttggtgcgtttggtttgctcgtcatttttggcatt
gcttatgcacttggaccgccgccgatggaactttcacaatcaacgacgatttatagcagt
gatgatgaagtcatcaatgagcagcatcaaggacaagagcgggaatggacggatctggag
gacgtttctccccatttggtcgatgcttttatcgctgtggaagaccgtaagtttttcgac
caccatgggtttgattacacgcgcatcggggcagctgttttgaataacattcaagcgacg
tccatgtcgcaaggggccagtacgatcacacagcaatatgcgcgtaatttattcctaaat
catgataaaacatgggatcgaaaaatccgtgaagcgctttacgccctccgtctggaatgg
catgttccgaaagaagatattctggaaggatatgttaacacgattaatttcggccatggt
gcttacggcattgaacaagctgcacagatgtattttaatacatctgcttctgatttgaat
gccgcccagtctgctttgcttgccggcttgccacgaggaccttcctattattctccttac
gtctatccggatcgggcagagaaccgccaacaaatgattttggagatgatgcatgaacag
ggaacgcttgagaccgccgaatacgaggaagcacttgacgagaccatgacgtacgaagca
gcagaggaagaggcgcttgaaacgacggcaccctactttcaagatactgttgaacaagaa
ctcgtggaccgctatgacctcgatcctgacgttcttgaagcaggtgggttgaatatttat
acaaccattgatccggatatgcaggaaagcacggagcgttacgtggaagcagagttgcca
accaatgatccgttacaaggagctgccgtgtccatagacccaagaaccggcgatgtaaaa
gcaatggttggaggtaaaaattacagcgagagccctttcaatcgcgcagttgatgcgcac
cgccctccaggctctgcatttaagccgtttctttactacgcggcactggaaaatgggttt
accgcggcaacaccgcttaaaagtgaaccgacctcttttcctaacccgcatggggatagc
cgttatgaacccggcaatttcaatgaagtatatgccgatgactttatcacactagcacaa
gcaatggcctattccgataatatctatgccgtgaaaaccaatgtcttccaagaaccggaa
tccctcgttgaaactgcgaaagcggcggggattgaaagtccactatcggcaaacttgtcc
cttgcgctcggcacctcggaagtcaacgtgttggagttgacaaaaggttatagtccgttt
gcaaacggaggcgagcaggtggaacatcgcttgattgaacgtgtggaagatcacgagggc
aacgtattgctggaaaccgagccggaaaaacaacaagtgtttgaaccggaactcgcctat
attgcgaccgatttaatgaagcaaacgtttgatccatccatgaatgattacgcggctgtc
accggccattccattgcccatttgttgcaaagaccggctgcgggaaaaagcggatctacc
ccctcggatagttggatggttggatttacgccagagctcgtgaccggtgtatgggttggt
tatgatgacaacaccgaacttgatcacggtgaacacgggcagattgcaaaacgcatctgg
gttaatgcccttgaaagcggattggacggccacctcaaacaggacttttccactcctgat
ggggtcgaagaggtggacatagatttggaaaccggattgctagctgacgatgcttgtggt
ccatcctataccgtatcttttttggaagacacggcaccaaaagaatcatgcgtcacgtat
cttgatgacgaagaagcggaagaagaagcacgggaagagcgaaataataaagagagtgaa
aaacttatggataaattaaaacgctggtttggcagtgatgaggcagagatgtag
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