Salicibibacter cibi: HUG20_18880
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Entry
HUG20_18880 CDS
T07369
Name
(GenBank) collagen binding domain-containing protein
Organism
scib
Salicibibacter cibi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen_bind
SpaA
Cna_B
Big_8
SdrD_B
bMG3
CarboxypepD_reg
Presenilin
GramPos_pilinBB
Motif
Other DBs
NCBI-ProteinID:
QQK81774
UniProt:
A0A7T6ZE15
LinkDB
All DBs
Position
complement(3788244..3792386)
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AA seq
1380 aa
AA seq
DB search
MAKRLGMIFIAVLIAFQPYLVQIQTATAQGSDDVATEAKLLDGETDLSQKDEVDREEQFE
LELAYQWSEQSDEQSISVTVPEEIILEDAGGDIENEDGQQVGTYQVENQNITLIPEEEDQ
QGVLVLQASWNANLIEEIEEADLTFQHPQELQEMEISFEPLITEEEDEEEQEAEEEEEQQ
EESDGRSEEDAADDEEPSDEQVTEEEAAQEDTDGSTEEEQEVEENEAKEETEEEAEVAEN
DEETSESEEAGESAEATQADTQNDKHGFNLEIGNVMDLDGNAYGEENLLDPAEEFWLGLS
WNLENDHNYEDGDTETFELPNGITIDDEMTGELVDDAGQVVATYTIGTDKQVELTFTDFV
ETHSNVEGWLEIISTLDEENVEIDDGDAIIEPIGEEGEIRIPIDLGEREKTIEKEGTPNS
SYNADEITWEVIINKDQVSLDNAIVTDVLPEGTEYQEGSLNVVELDVDLNGNVIGDGDEV
EGIDETFADGELNIPLGDIQDAYRIEYVTSVTDNEETEFQNNATLSDDELEDTSANATVT
IDRGDPINKNAVAEYDPLTGMIEWEIEFNYDEQNLEDVTLSDSWTPEGALELVEDSLDFI
EMEIDEDGSAHETGNVGLPEGAELQSIEDGFEVTGITTDNPYKVTYQTEVTDRVLDGFSV
ENTAGFGGESETSGTGIGTYYGAKSAGTIDYAENTVDWTIRINHDEYPMENISIEDTLGE
GLTLIEDSMAVTVGGEDYTDYALSGENPFTIAFPEDYTTDEEILITYQTNYVADELPDNT
ATNHAAITWTPEGEEDSITRDVEAETELNWQTEQRDWKNGSYDPESKEITWTVYSNYREN
NINDLIVTDAPQGNQAIIEDSVEVTELAIEPNGDITEGNTLEDVASVDEGENTLQVDIGD
TNNAYKIEYRTSLEGLSDIQSEYVNEAEVLDGDETLSNLEATVGIAESATYGDKSGDQDG
KQVQWSIDVNLGQQEISNLTLEDSISDNQAYLEDTITVYHASVDVNGNTTRGDEVSEDEY
ELTFNEDDQAFTIEWNDTVERPFIVEYSTLFFAGHGEDVTNSYDITGDNIIEDGQTDGDG
SVTISQTSSGGGSGEAGYLVIDKVDTTDGGEEKLAGAEFDLIDADTGNVLKTGITDDDGQ
IDFGRLLYGDYVLHETTVPDGYVTPEESRTITIDEAYDPDADLTDYAYTVENYEPVFAIE
LAKVDDLGENISGVEFELYNLDDDLIATETTDADGNILFEDLPGAGTYYLEETETPAGYE
PNEDSIEVEVGAEEREPVIITVENQRELTEVSGTKTWDDADNQDGIRPDSITVNLLANGD
TVDSTEVTAEDDWEYSFTGLPQYDNEEEITSYTVEEEDVDVDGYTSEVDGHDIINSYTPK
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaagcgtttaggaatgatctttattgcagttttaatcgcgttccaaccttatttg
gtgcaaatacaaactgcgacagctcaaggtagtgacgatgttgcaacggaagccaagttg
ttagatggagaaaccgatctaagtcaaaaggatgaagtagaccgtgaagagcagtttgaa
ctagaacttgcttatcaatggtcggaacaatcggatgagcagtctatctccgtaacggta
ccagaagaaattattttggaggatgccggcggggacattgaaaatgaggatggccagcaa
gttggaacgtatcaagtggagaaccagaacatcacgttgattcccgaagaggaagatcag
caaggtgttcttgttttgcaggcttcttggaatgctaatctcattgaagagatcgaagaa
gcggaccttacattccaacatcctcaagaattgcaggaaatggaaatttcctttgagcct
ttgataacagaggaagaggatgaagaagaacaagaagcagaagaggaagaagagcagcag
gaagaaagtgacggccgttctgaagaggatgctgccgatgacgaggagccatcagacgag
caggtaaccgaggaagaagcagcacaggaagacaccgatggttcaacagaagaagaacaa
gaagtagaagagaatgaagcaaaagaagaaacagaagaagaagcagaagtggctgaaaat
gatgaagagacttcagaatctgaggaagccggagaatcagctgaggcgacgcaggccgac
acacagaatgacaagcacgggtttaacttagagattggcaatgtgatggatctggatggc
aatgcatacggcgaagagaatttactggatccggcagaagaattttggctagggctgagc
tggaacttagaaaatgaccataactatgaagatggggatacggaaacttttgaacttccc
aacggcattacaatcgatgatgagatgactggtgagttagtggatgatgccggtcaagtc
gtagcaacctatacaataggcacggataaacaagtcgaattaacatttacagattttgtt
gaaacgcatagcaatgtagaaggttggctagaaatcatttcaacattggatgaggaaaat
gttgaaatcgacgatggcgacgcgattattgaacccattggcgaagagggcgaaatcagg
atccctattgatttaggtgaacgagagaaaacgatcgaaaaagaggggacaccaaatagt
agctataatgctgatgaaattacatgggaagtaatcattaataaggatcaagtgtcatta
gataatgcaatcgtcaccgacgtccttcccgaaggaacggagtatcaggaaggaagcctg
aatgtcgttgaattagacgtcgatttaaacggcaatgtcattggcgatggcgatgaagtc
gaaggcatcgatgagacgtttgctgacggtgaattgaatatcccgctcggcgatattcaa
gatgcttaccgcattgagtatgtcacgtcagtcacggacaatgaggaaacggaattccaa
aataacgcgacactttcagatgatgaactggaagatacgtcagcaaatgctaccgtaacc
attgatcgaggcgacccgattaataaaaatgctgtcgcagagtatgatcctttaacaggg
atgattgaatgggaaattgaattcaactacgatgagcagaatttggaagatgtcaccctg
tctgattcatggacgcctgaaggggcactggaattagtcgaggacagtctcgatttcatt
gaaatggagattgatgaagacggcagtgcacatgaaactggtaatgtcggcctgccggag
ggtgctgaacttcaatcgattgaagatggatttgaagtcaccggaattacaaccgataac
ccatataaagtcacgtatcaaacagaagtgacagaccgtgtgttggatggttttagcgtt
gagaatacggctggctttggcggcgaatcagagacttccggcacgggtatcggtacgtac
tatggtgcgaagtcagccggaacaattgactacgcagaaaataccgttgattggaccatc
cgcattaaccatgatgaatacccaatggagaatatcagtatcgaggatacactgggtgaa
gggttaacgttgattgaggattcaatggcggtaaccgttggtggagaagattatacagac
tatgcactttctggcgaaaatccattcaccattgcgttccctgaagactacacgacagat
gaagagatccttatcacgtatcaaaccaattatgttgcagacgaattgccggataatacg
gcaacaaatcatgcagctatcacgtggacgccggaaggcgaagaagactcgattacaaga
gacgttgaagcagaaaccgagctaaactggcaaacagagcaacgtgactggaaaaacggg
tcatacgatcctgaatccaaagaaattacgtggacggtttattccaattaccgtgaaaat
aacattaacgatttaattgttaccgatgcgccgcaaggtaatcaagcgatcatcgaggat
tctgttgaagtcacagaactggccatagagccaaatggtgatataacggaaggcaacacc
ttggaagatgtcgcaagtgtcgacgaaggggaaaatacattacaagtcgacattggtgac
acaaacaacgcgtataaaattgagtacagaacatcgctcgaaggtttaagtgatatccaa
agcgagtatgtgaacgaagcagaagtattagatggagacgaaacgttatccaatttagaa
gccacagtaggtatagcagaatcagctacgtatggcgacaagtccggtgatcaagatgga
aaacaagtgcagtggtccatcgatgtgaaccttgggcaacaagaaatcagtaacttaaca
cttgaggactccatctctgacaatcaagcgtatcttgaagatacgattacagtgtatcat
gcaagcgttgatgtaaatggaaataccaccagaggagacgaagtttccgaagatgagtat
gagttaacgtttaatgaagatgatcaagcatttacgatcgaatggaacgacacagtagag
cgtccgtttatcgttgaatattccacattgttctttgcagggcatggcgaagatgtcaca
aactcctatgacataacaggtgacaatatcattgaagatggtcaaacagatggtgacggt
tcggtaaccattagccaaacatcttcaggcggcggatcaggtgaagccggctatctcgtg
atcgataaggttgatacaacagatggcggggaagaaaagcttgccggagcagaatttgac
ttaatcgatgcagataccggcaatgtattaaaaaccggcataaccgacgatgatggccaa
attgattttgggcgtttgctatatggtgactatgtactacacgaaacgactgtaccggat
ggttatgtcacaccggaagaaagccgaaccattaccattgatgaagcatacgatccggat
gcagatctaaccgattatgcctatactgtggagaattatgaacctgtatttgctatcgaa
ttggcgaaagtcgatgacttaggggaaaatatctccggagttgagttcgaactctataat
ttggatgatgacttaatagcaactgaaacaaccgacgccgatggcaacattttgtttgaa
gatttaccaggggcaggaacatactacttggaagaaacagagactcccgctggttatgaa
ccaaatgaagatagcattgaggtagaagttggtgcagaagaaagagaaccggtaataata
acagtagagaaccaacgtgaattaacggaagtctccggaacaaagacgtgggacgatgct
gacaaccaggatggtatccgcccggattccatcaccgtgaatcttttagctaatggcgat
acagtcgattccactgaagtcacggcagaagacgattgggaatatagcttcacaggattg
ccgcaatatgacaatgaggaagaaattacgtcgtacacggtagaggaagaagacgtggac
gttgatggttacacatcggaagtggatggccatgacattataaacagctataccccgaag
taa
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