Spermophilus citellus (European ground squirrel): 308634254
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Entry
308634254 CDS
T11988
Symbol
RET
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
scil
Spermophilus citellus (European ground squirrel)
Pathway
scil04010
MAPK signaling pathway
scil04020
Calcium signaling pathway
scil04151
PI3K-Akt signaling pathway
scil05200
Pathways in cancer
scil05216
Thyroid cancer
scil05223
Non-small cell lung cancer
scil05230
Central carbon metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
308634254 (RET)
04020 Calcium signaling pathway
308634254 (RET)
04151 PI3K-Akt signaling pathway
308634254 (RET)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
308634254 (RET)
05230 Central carbon metabolism in cancer
308634254 (RET)
09162 Cancer: specific types
05216 Thyroid cancer
308634254 (RET)
05223 Non-small cell lung cancer
308634254 (RET)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scil01001
]
308634254 (RET)
Enzymes [BR:
scil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
308634254 (RET)
Protein kinases [BR:
scil01001
]
Receptor tyrosine kinases (RTK)
RET family
308634254 (RET)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD1
RET_CLD4
RET_CLD3
Pkinase
RET_CRD
Cadherin
RIO1
Pkinase_fungal
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
308634254
NCBI-ProteinID:
XP_081124136
LinkDB
All DBs
Position
15:16177768..16238532
Genome browser
AA seq
1109 aa
AA seq
DB search
MAKATSGAAGLRLLLLLPLLGEAPLGLYFSRDAYWERLYVDQPAGTPLLYVHALRDAPGE
VPSFHLGQHLYGFHRPRLHENNWIRVQEDTGLLYLNQSLDHTSWEKLSIRNGGFPLLTIF
LQVFLSSTPLRESECQWPGCARVYFSFYNTSFPACSSLKPRELCFPETGLSFRIRENRPP
GTFHQFRLLPVQFFCPNISVAYRLLEGESLPFRCAPDSLEVSTRWALDREQQERYDLVAQ
CTVRIGKHEEEVMVPFPVTVYDEDDSAPTFPGGVDTASAVVKFKRKEGTVVATLRVFDAD
VVPASGELVRRYTNTLLPGDPWAQQIFRVEHSPNETLVQANGSFVRATVHDYKLVLNRSI
SISENRSLQLTVLVNDSDFQGPGSGVLLLHFNVSVLPVILRLPSTYSFSVNKGARHYAQI
GKVCVENCQEFSGIHVQYKLQPSSANCSILGVVTSAEDTSGTLFVNDTETLQRPECAELQ
YTVVASDRQARKQAQAPLLLTVEGTYVTEKEGCPLSCAVNKRRSECEECGGLGSPTGRCE
WRQGDGKGITRNFSTCSPNTRTCPDGHCDAVENRNINICPQDCLRGSIVGGHEPGERRGI
KAGYGICNCFPEKKKCFCEPEDSMGPLCDELCRTVIAAAVLFSFIVSVLLSTFCIHRYHK
QAHKPSIASAEMTFCRPAQAFPVSYSSSGARRPSLDSVENQVSVDAFKIPEDPKWEFPRK
NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASPSELRDLLSEFNLLKQV
NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRDSRKVGPGYMGSGGSRNSSSLDHPD
ERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE
DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN
LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKSRDYLDLAAST
PSDSLLYDDGLSEEETPLVDCNNAPLSRTLPSTWIENKLYGMSDPNWPGESPVPLTRADG
TNTGFPRYANDSVYANWMVTLSGKINGHV
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcgacgtccggcgccgcggggctgcggctgttgctgctgctgccgctgctg
ggcgaagctcccctgggcctctacttctctagagatgcttactgggagaggttgtatgtg
gaccagccagctggcacgcccctgctctatgtccatgccctccgagatgcccctggagag
gtgcccagctttcacctgggccagcacctctatggcttccatcgcccacggctgcatgag
aataactggatccgtgtccaggaagacactggccttctctaccttaaccagagcctggat
cacacttcctgggagaagctcagcattcgcaatggtggcttccccctgctcaccatcttc
ctccaggtcttcctgtcatccacacccctgcgtgaaagtgagtgccagtggccaggttgt
gcccgcgtgtacttctccttctacaacacctccttcccagcttgcagctccctcaaaccc
agagagctgtgcttccctgagacgggcctttccttccgcatccgggaaaataggccccct
ggcaccttccatcagttccgcctgctgcccgtgcagttcttttgccctaacatcagtgtg
gcctacaggcttctggaaggtgagagtctgccattccgctgtgctccggacagcctagag
gtgagcacgcgctgggccctggatcgtgagcaacaggagagatatgatctggtcgcccag
tgcaccgtgcgcattggaaagcatgaggaggaggtgatggtgcccttccctgtgaccgtg
tatgatgaggacgactcggcccccaccttccctggaggtgtggacaccgccagtgcagtg
gtcaaattcaagcggaaggagggcaccgtggtagccaccctccgtgtctttgatgcggat
gtggtgccagcatctggggaacttgtaaggcgatacacaaacacgctgctccctggggac
ccctgggctcagcagatcttccgcgtggagcattcgcccaacgagaccttagtccaggcc
aacggcagcttcgtgcgggcaactgtgcatgactataagctggttctcaaccggagcatc
tccatctcagagaaccgatccctgcagctcactgtgctggtcaatgattcagacttccag
ggtccagggtcaggtgttctcctcctccacttcaatgtgtcagtgctacctgtcatccta
cgcctgcccagcacctattccttctctgtaaacaagggggcccgccattatgcccagatt
gggaaagtctgtgtggaaaactgccaggaattcagcggcatccacgtccaatacaagcta
cagccatccagcgccaactgtagtatcctgggggtggtcacctcagctgaggacacctcg
gggacactgttcgtaaacgatacggagaccctgcagcggcccgagtgtgccgagctccag
tacaccgtggtggccagtgaccggcaggcccgcaagcaggcccaggccccgctgctcctc
acagtggaggggacatatgtgactgagaaggaaggctgccccctatcctgtgcggtcaac
aagaggcggtctgagtgtgaggagtgtggtggcctgggctctccaacaggcaggtgtgag
tggaggcaaggtgatggcaaagggatcaccaggaacttttccacctgctcccccaacacc
aggacttgccctgatggtcactgtgatgctgtggagaatcggaatatcaacatctgcccc
caagactgcctcaggggcagcattgttgggggacatgagccaggggagcgccggggcatt
aaagccggctatggcatctgcaactgcttccctgagaagaagaagtgcttctgtgagcca
gaggacagcatgggcccattgtgtgatgagttgtgtcgcacagtgatcgcagcagctgtc
ctcttctccttcatcgtctcagtcctgctctctaccttctgcatccaccgctaccacaag
caggcccacaaaccatccattgcctctgctgagatgaccttctgtcggcctgcccaggcc
ttcccggtcagctactcctcatctggtgcccgccggccctcactggactctgtggagaac
caggtctctgtggatgccttcaagatcccggaggatccaaagtgggaattccctcggaag
aacttggttcttggaaaaaccctgggagaaggcgaatttggaaaagtagtcaaggcaacc
gcattccgtctgaagggcagagcagggtacaccactgtggctgtgaagatgctgaaagag
aatgcctccccaagtgagctgcgggacctgctgtctgaattcaacctcctgaagcaggtc
aaccacccacatgtcatcaagctctatggggcctgcagccaggatgggccactccttctc
attgtggaatatgccaagtatggctccctgcggggtttcctccgagacagccgcaaagtg
gggcctggctacatgggcagtggaggcagccgcaattccagctccttggaccacccggat
gagcgggcactgaccatgggtgacctcatctccttcgcctggcagatctcaaggggcatg
caatatctggctgagatgaagcttgtccatcgggacttggcagccagaaatatcctggtt
gctgagggccggaagatgaagatttcagattttgggctgtctcgagatgtttatgaagag
gattcttacgtgaagagaagcaagggccggattcctgtcaaatggatggcaattgagtcc
ctttttgatcatatctacaccacccaaagtgatgtgtggtccttcggggtcctgctgtgg
gagatcgtgaccctggggggaaacccctaccctgggattcctcctgagcggctcttcaac
cttctgaagacaggccaccggatggagaggccagacaactgcagtgaagagatgtaccgt
ctgatgctgcagtgctggaagcaagaaccggacaagaggccagtgtttgctgacatcagc
aaagacttggagaagatgatggtcaagagcagagactacttggaccttgctgcatccacc
ccatccgattcattgctttatgatgatggcctctcagaagaggagacacccctggtggac
tgtaataatgctcccctctctcgcaccctcccttccacatggattgaaaacaaactctat
ggcatgtcagacccgaactggcctggagagagtcctgtaccactcacgagagccgatggc
actaacactgggtttccaagatatgcaaatgatagtgtatatgctaactggatggtcacc
ctcagcggcaaaattaatggacacgtttga
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integrated database retrieval system
