Spermophilus citellus (European ground squirrel): 308656129
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Entry
308656129 CDS
T11988
Symbol
NUP210L
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
scil Spermophilus citellus (European ground squirrel)
Pathway
scil03013
Nucleocytoplasmic transport
scil05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
scil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
308656129 (NUP210L)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308656129 (NUP210L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scil03019
]
308656129 (NUP210L)
Messenger RNA biogenesis [BR:
scil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
308656129 (NUP210L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_13th
Ig_NUP210_15th
Ig_NUP210_5th
Ig_NUP210_7th
Ig_NUP210_14th
Ig_NUP210_2nd
Ig_NUP210_8th
Ig_NUP210_9th
Ig_NUP210_6th
Ig_NUP210_4th
Ig_NUP210_16th
NUP210_Ig
Big_2
Ig_Eae
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-GeneID:
308656129
NCBI-ProteinID:
XP_081162971
LinkDB
All DBs
Position
9:complement(5364092..5470153)
Genome browser
AA seq
1738 aa
AA seq
DB search
MVRALDAEGNTFSSLAGMMFEWSIAQDNDPAREERSSKIRILKFSEAEYSPPHYIAEMEN
EEKQGDVILVSGIRTGAAIVKVRIYEQFYKKVAAALIRLLVLENIFLIPSHDIYLLVGAY
IKYQVAKMVQGRTTEVKFPLEHYILELQDHRFTHNGSLSGKVALLDERTATVTALRLGQT
NLVFVHKNVHMRSVSGLPNCTIYVVEPGFLGFTVYPGDRWSLEVGQVYVITIEVFDRSST
KVYISDNLRITYGFLEEYFKEQLTTVNGSYHVVKALKDGVVVINASLTSIVHQNNNIHPV
KCIIKHQQEVKIYFPIKLTPNFLAFPHHPLGMLYRYKVQVEGGSGNFTWTSSNETVAMVT
TKGVVTAGQVRGNSTVLARDVQNPFRYGEIKIYVLKLNKMELLPFHADVEIGQIIEIPIA
MYHVNKETKEIVAFTDCSHLSLDLNMDKQGVFTLLKEGIQRPGPMHCSSTHIAAKSLGHT
LVIVSVTEYEEYLESSATFAAYEPLKALNPVEVALVTWQSVKEVVFEGGPRPWILEPSRF
FLELSMERTEKIKVTEVRLPAKRKQNQYIYQILCLDLGEQVLTFRIGNHPGVLNPSPAVE
VVQVRFICAHPASMSVTPVYKVPAGAQPCPLPQHNKQLIPVSSLRDTVLELAVFDQHRRK
FDNFSSLMLEWKSSNETLAHFEDYKSMEMVAKDDGSGQTRLHGHQILKVHQIKGTVLIGV
NFVGYSEKKSPKDISNLPRSAAVELLLVDDVTVLPEKATIYNHPRVKEIFSLVEGSGYFL
VNSSELDIVTITYMEAESSVQLVPVHPGFLTLEVYDLCLAFLGPATAHLQVSDIQELELD
LIDKVEIGKTVLVTVRVLDSSKRPFLNKYFRNMELKLQLASAIVTLTLMEEQDEYSENYI
VRAVTIGQTTLVAIARDKMGRKFTSAPRQIEVFPPFRLVPEKITLIPTNMMQVMSEGGPQ
PQSIIHFSISNQTVAVVNRRGQVTGKVVGTAVVHGTIQTVNEDTGKVIVFSQDEVQIDVV
QLRAVRILAAATRLITATEMPVYVMGVTSTQTPFSFSNANPGLTFQWSMSKRDVLDLVPR
HSEVFLQLPIENNFAMVVHTKAAGRTSIKVTVRCVNSSSGQFEGNLSELSDEVQILVFEK
LQLFSSECQPEQILMPMNSQLKLHTNREGAAFVSSRVLKCFPNSSVIEEDGEGLLKAGSI
AGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLKMSSQPKLYTTQGRTLSAFPLGMSLTFI
VQFYNSIGEKFHTHNTQLYLALNRDDLLLIGPGNRNYTYMAQAVNKGVTLVGLWDQRHPG
MADYIPVAVEHAIEPDTKLTFVGDVICFSTHLVNQHGEPGIWMISPDSILQTDIVTGVGV
ARSPGTATIFHDIPGVVKTYREVVVNASSRLTLSYDLKTHLTNTPNSTVFKLFITTGRNG
INLKGSCTPNQALAITKVLLPETLMLCHVQFSNTLLDIPASKVFHVHSDFIMEKGVYVCL
IQVRPQSEELLQALSTAATSVYGWATLVSERSKNGMQRILIPFLPAFYINQSELVLRHKG
DVGEIKVLGVDRVLENLEVFPSSPVLVISDHRQSLLTPGLAVYPVRIVNFTAFQQMASPV
FINISCVLTSQSEAVVVRAMKEKFGADQCEGSGVFKRFIGSYQILLFTLFAVLASTAFIF
LAYSAFLNKIQTVPVVYVPTIGTPQPGSYTSARSPPFLSPQPPLTQSRLQHWLWSIRH
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggtgagggcattggatgctgaaggaaatacttttagtagtttggcagggatgatgttt
gagtggagcattgcccaggataacgacccagcaagagaggaacggtctagcaaaattagg
attctgaaattctctgaagcagaatattctcctccacactatatagctgagatggaaaat
gaagagaaacaaggagatgtgattttggtgtctggaattaggactggtgctgctatagta
aaagttagaatttatgaacaattctataagaaagtggcagcagcactgatacgtctgctt
gttttggaaaatatatttcttataccatcccatgatatttatctcttagtaggagcatat
attaaataccaagttgcaaaaatggttcagggaagaacgacagaggtgaaatttcccctg
gaacattatatactggaattgcaagaccatagatttacacataatgggtctctttctggg
aaagtggctttactggatgagagaacagccacggtgactgccctccgactaggccaaact
aatcttgtctttgttcacaaaaatgtccatatgcgatctgtgtctggactcccaaattgc
actatatatgttgtagagcctggatttttaggattcaccgtctaccctggagaccgatgg
agtctagaggtgggacaggtgtatgttattacaatagaagtgtttgatagaagcagcaca
aaggtctatatttcagataatctcaggattacatatggttttctagaggagtactttaaa
gaacaactaaccactgtgaatggatcttaccatgtagtaaaagccttgaaggatggtgtg
gtggtgataaatgcatccctgacttccatcgttcatcagaataacaatattcatcctgta
aaatgtataataaaacaccagcaagaagtgaagatttattttcccatcaagcttacacct
aactttctggcatttcctcatcatcctctgggcatgttgtatcgttataaagtacaggta
gagggtggtagtggcaacttcacctggacctcttctaatgaaacagtggccatggtaacc
accaaaggggtggtgactgcaggtcaggtcagagggaacagtactgttttggcccgagat
gtacaaaatccctttcggtatggggaaattaagatatatgtcctaaaactgaacaaaatg
gaactgttaccatttcatgcagatgtggagattggccaaattatagaaatccccattgca
atgtatcatgtaaataaggagaccaaagagatagtggcattcacagattgctctcattta
tccttggatttaaacatggataagcaaggagtcttcactcttctcaaagaaggtattcaa
agacctggaccaatgcattgttctagtacacatatagcagccaaatctttaggccatact
ctggtaatagtgagtgtgactgaatatgaagagtatttggagagcagtgccacatttgct
gcttatgagcccttaaaggccctaaaccctgtggaagtggcattggtgacatggcagtct
gtgaaggaagtagtgtttgaagggggccctcgtccgtggatcctggaaccctcccgtttt
tttttggagctgagcatggagaggacagagaagatcaaagtgacagaagtccgactgcca
gccaagagaaagcagaaccagtacatataccagatcctgtgcctggatttaggggagcaa
gttctcacatttcgaattggaaatcacccaggagtcctgaaccctagtccagctgtggag
gttgtacaagtgcgcttcatatgtgcccatcctgccagtatgtccgtaacaccagtatac
aaggtgccagctggtgcccagccctgtcctctgcctcagcacaacaaacaactgattcct
gtgtcaagcctgagggacacagttctggaactggcagtgtttgatcaacacaggagaaag
tttgataatttcagttcgctaatgctagaatggaagtcttccaatgagacactagcccat
tttgaagattataagtcaatggagatggtagccaaagatgatggcagtgggcagacccgg
ttacatggtcatcagatccttaaagtacatcagatcaaagggactgtactcattggagtc
aattttgtgggctattcagagaagaaaagtccgaaagatatttccaacttgccaagatct
gcagctgtggagctgctcctggtcgatgatgtaactgtgttgccagagaaagccaccatc
tataaccaccctcgtgtgaaggaaatatttagccttgtggagggatctggttatttttta
gtcaacagcagtgaactggatattgtcaccatcacttatatggaagcagaaagttctgtc
cagttagttccagtacatcctggatttctcaccttggaggtctatgatctgtgcttggct
ttcttgggtccagcaacagcccatctccaggtgtcagacatacaagagctggaacttgat
ctgatagataaggttgagataggcaaaactgtattggtgactgtgagggttcttgactct
tccaaacgcccattcctaaacaaatacttcagaaacatggagctcaaattgcagttggca
tctgccattgtcaccctgacactaatggaggaacaggatgaatactctgaaaattatata
gttcgggctgtcactattgggcaaaccacactcgtggctattgccagagacaagatgggg
agaaaattcacatcggctcctcgacaaattgaagtatttcctccattcagacttgttcca
gagaaaattacactgattccaactaacatgatgcaggtaatgtctgaaggtggccctcag
ccccaatctatcattcacttctccatcagtaatcagactgtggctgttgtcaataggagg
gggcaagttacagggaaagtggttggcacagctgtggtccatggcaccatccagacagta
aatgaagatactggcaaagtcattgtgttttcccaggatgaagtacagattgatgttgtt
cagctgagggctgttaggatccttgcagctgcaactagactcatcacagctactgagatg
ccagtttatgttatgggcgtgaccagtacccagacccctttctccttcagcaatgccaac
cctgggctcacattccagtggtccatgagcaaaagagatgtattggatctagtacccagg
cattcagaggttttcctacagcttccaatagagaataactttgccatggtggtccacacg
aaagcagctggcaggaccagtatcaaagtcactgttcgatgtgtaaacagttcctctgga
cagtttgagggaaatttgtcagaactgtctgatgaagttcagattctggtgtttgaaaaa
ctccaacttttctcttcagagtgccaacctgagcagattttaatgcctatgaattctcag
ctcaaactccataccaacagggaaggagccgcctttgtgagttcccgtgttctcaagtgt
ttccctaattcatctgtcattgaggaagatggtgaagggctcctgaaagctggttccatt
gcaggtactgctgtgttggaagtcacttctattgaaccttttggagtcaaccaaacaacc
ataactggggtccaggtagcaccggtaacatacctgaaaatgagcagccaacccaagcta
tacacaacacaaggaaggaccctatcagcctttcccttgggcatgtctctcaccttcatt
gttcagttttataatagcattggagagaaattccacacccacaatactcagctttatctg
gctctgaacagagatgacttgctacttattggaccagggaataggaactatacttatatg
gcccaggctgtaaataaaggggtgacccttgtgggactctgggaccagagacacccaggc
atggcagactatattcctgttgctgtggagcatgccattgagccagacaccaagcttacc
tttgttggggatgtcatctgcttcagcactcacctcgtcaaccagcatggtgaacctggg
atatggatgatttctcctgacagtattctacagacagacattgtcactggagtaggagta
gccaggagtccaggaactgcaacgatttttcatgacattccaggagtagtgaaaacatat
cgagaggtggtcgtcaacgcatcatcaagattaactctcagttatgacctcaagactcat
ctcactaacacccctaattcaactgtattcaaacttttcatcaccactggcagaaatggt
atcaatctcaaaggatcctgtactccaaatcaggccttggccattacaaaagtacttctt
ccagagactctcatgctgtgccatgtacaattcagtaatactttactagacattccagca
agtaaagtctttcatgtccattcagacttcatcatggagaaaggggtttatgtctgccta
atccaggttagaccacagtcagaagagttgcttcaggccctcagcacggctgccacctca
gtctacgggtgggccacactggtcagtgaacgtagcaagaatggaatgcaaagaatcctc
attcctttccttccagccttttacatcaaccagtcagaattggttctcagacacaaagga
gacgttggggagattaaagtgctgggagttgacagagttcttgagaacctagaggtcttc
cccagctccccagttctagtgatctctgatcataggcagtctctgctcacccctggcctg
gctgtctatcctgtaagaattgtcaactttactgccttccagcagatggcatcacctgtt
ttcattaatatttcctgtgtgctcaccagtcaaagtgaggccgtggtagtgagagctatg
aaggagaagtttggtgcagatcagtgtgaaggttcaggagtcttcaagcggttcattggt
tcttaccagatcctcctctttaccctctttgcggtgttggcatcaacagctttcatcttt
ctagcatacagtgccttcctaaacaagattcagaccgttcctgtggtttatgtaccaact
ataggaacaccacagccaggttcttatacctccgcaaggtctcctcctttcttgagccca
caacccccactgacccagagtcgactacagcattggttatggagcataaggcactaa
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integrated database retrieval system
