KEGG   Streptomyces clavuligerus: BB341_06790
Entry
BB341_06790       CDS       T04717                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
sclf  Streptomyces clavuligerus
Pathway
sclf03030  DNA replication
sclf03410  Base excision repair
sclf03420  Nucleotide excision repair
sclf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sclf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BB341_06790
   03410 Base excision repair
    BB341_06790
   03420 Nucleotide excision repair
    BB341_06790
   03430 Mismatch repair
    BB341_06790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sclf03032]
    BB341_06790
   03400 DNA repair and recombination proteins [BR:sclf03400]
    BB341_06790
Enzymes [BR:sclf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BB341_06790
DNA replication proteins [BR:sclf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BB341_06790
DNA repair and recombination proteins [BR:sclf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BB341_06790
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BB341_06790
   MMR (mismatch excision repair)
    DNA ligase
     BB341_06790
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BB341_06790
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 Nlig-Ia HHH Zn_ribbon_TFIIB ILEI
Other DBs
NCBI-ProteinID: ANW21836
LinkDB
Position
complement(1765515..1767707)
AA seq 730 aa
MPAQDTPGLPARARERHAELAEQIEEHRFRYYVKDQPVISDSEFDRLLRSLEELEERHPA
LCTPDSPTQKVAGQYETDLAKVEHRERMLSLDNAFDEEELTAWAERVEREVGSPDFHFLC
ELKVDGLAVNLTYEKGRLTRAATRGDGRIGEDITPNIRTIADVPDRLRGDRIPELVEIRG
EVYFPMDQFQQLNERRIAAGEQPYANPRNSASGSLRQKDPKVTATLPLHMVVHGIGAREG
FDIDCLSHAYDLLREWGLPTARHNRVVDSLEGVREFIAHYGENRHSMEHEIDGVVVKLDE
IPLQGRLGSTARAPRWAIAWKYPPEEVNTRLVDILVGVGRTGRVTPYAQVEPVQVAGSEV
EFATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEILGPVVELRDGTEREFVMPAECPECGT
ELRPMKEGDVDLRCPNARSCPAQLRERLFYLAGRRSLDIEHFGYVAAAALTRPLEPAEPP
LKDEGDLFSLTVEQLLPIRAYVLDPDSKLPKRDPKTGEEKIATVFANQEGEPRKNALAML
RNIEAAKTRPLARVLTGLSIRHVGPVAAEALAREFRSVQRIQEATEEELAATEGVGAIIA
ASLKQWFAEEWHQEILRKWEAAGVRMAEEGADEEQGPRPLEGVTVVVTGTLQDYTRDGAK
EALQSLGAKVTGSVSKKTAFVVVGDNPGSKFDKAMQLKVPVLREDGFTLLLEQGPDAARE
AAVKEEPEEE
NT seq 2193 nt   +upstreamnt  +downstreamnt
ctgcccgcgcaggacacccccgggctgcccgcgcgggcacgggagcgccacgcggagctg
gccgagcagatcgaggagcaccgcttccgctactacgtcaaggaccagccggtcatcagc
gacagcgagttcgaccggctgctgcgctcgctggaggagctggaggagcgccaccccgcg
ctgtgcacgcccgactcgccgacccagaaggtcgccgggcagtacgagacggacctggcg
aaggtcgagcaccgcgagcggatgctctcgctggacaacgccttcgacgaggaggagctg
accgcctgggccgagcgggtcgagcgcgaggtcggcagcccggacttccacttcctgtgc
gagctgaaggtcgacggcctcgccgtcaacctgacctatgagaaggggcggctcacccgc
gcggcgacccggggcgacggccggatcggcgaggacatcacaccgaacatccgcaccatc
gccgatgtgcccgaccggctgcgcggggaccggattccggagctggtggagatccggggc
gaggtctacttcccgatggaccagttccagcagttgaacgagagacggatcgcggccggg
gagcagccctacgccaatccgcgcaactccgcctcgggctcgctgcggcagaaggacccc
aaggtcaccgcgacgctcccgctgcacatggtggtccacggcatcggcgcccgggagggc
ttcgacatcgactgtctctcccacgcctacgacctgctgcgcgagtgggggctgcccacc
gcccggcacaacagggtcgtggactccctggagggtgtgcgggagttcatcgcccactac
ggcgagaaccgtcactcgatggagcacgagatcgacggcgtggtcgtcaagctggacgag
atcccgctccaggggcggctcggctccaccgcgcgggccccgcgctgggccatcgcctgg
aagtacccgcccgaggaggtcaacacccggctggtggacatcctggtcggcgtcggccgc
accggccgggtcacgccgtacgcccaggtggagccggtgcaggtggcggggtccgaggtc
gagttcgccaccctgcacaaccaggacgtggtgaaggcgaagggcgtcctcatcggggac
acggtggtgctgcgcaaggccggtgatgtcatccccgagatcctgggcccggtggtggag
ctgcgggacgggaccgagcgggagttcgtgatgcccgccgagtgccccgagtgcggcacg
gagctgcggccgatgaaggagggcgacgtcgatctgcgctgccccaacgcccggtcctgc
ccggcacagctgagggagcgcctgttctatctcgcgggccgcagatccctggacatcgag
cacttcggctatgtcgccgccgccgccctcacccggccgctggagcccgccgagccgccg
ctcaaggacgagggcgacctcttctccctcaccgtcgaacaactgctgcccatccgggcg
tatgtcctggacccggacagcaagctgcccaagcgggacccgaagaccggcgaggagaag
atcgccaccgtcttcgccaaccaggagggcgagccccgtaagaacgccctcgcgatgctg
cggaacatcgaggcggcgaagacccgtccgctggcccgtgtcctgacagggctgtccatc
cgccatgtgggcccggtggcggccgaggcgctggcccgggagttccgttcggtccagcgg
atccaggaggccacggaggaggagctggcggcgacggagggcgtcggcgccatcatcgcg
gcctcgctcaagcagtggttcgcggaggagtggcaccaggagatcctgcgcaagtgggag
gccgccggggtgcggatggcggaggagggggccgacgaggagcagggcccccggccgctg
gaaggagtcaccgtcgtggtgacgggaacgctccaggactacacaagggatggcgcaaaa
gaggcccttcagagccttggcgcgaaagtgaccggttctgtttccaagaaaaccgctttt
gtggttgtcggtgacaaccctggttccaagttcgacaaagccatgcagttgaaggtgccg
gttctccgtgaggacggctttacccttctgctggaacaagggcctgatgcggcacgtgag
gctgctgtgaaggaagagccggaagaggaatga

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