Styela clava (leathery sea squirt): 120325661
Help
Entry
120325661 CDS
T07291
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120325661
Membrane trafficking [BR:
sclv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120325661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
YebO
Motif
Other DBs
NCBI-GeneID:
120325661
NCBI-ProteinID:
XP_039247685
LinkDB
All DBs
Position
Unknown
AA seq
2211 aa
AA seq
DB search
MSLTVKIGTLSGLKGKGNRQAKITFRDHSYVTQTIEDCESEADFYETFEWPVASAIEPTE
QIHIQFYNFSKVFSNRPIGSFDMLLQEVVARGRLAITETLLDSNNTALSALVSLDFKYVA
PDGKVGDWAMDEFIPEIVVADDFQSIHTTETTGSKKSLLHDVMFRGGRTPNDMRYELVDE
SSSLINPPTSHWEERTREKNAISRRPIDLWKKGAGFTTPEVNRSAAAILSPKSKWKHFAQ
KAATMNPGEGAISSSTPVLPDGDVTKFPISMTSFRKKSAAAIGTQRHDSSQLSILSAFSG
KTKGILKGFRGKQRPPDDTDGAVIIGNQAALADGIRQSRGEPKIEIDTVSIASMQMVEEN
VTNKRSKPEIRFEPVGMRPQDFQVSVSVIEARQLSGTNMDPVVLVQVGDDKKYTSKKEST
NCPYYNEVFVFDYNIPKQTLFDKMIQLTVLHSRNIVRSGTLVGTFKMDVGTVYANNDHMF
FHKWAVLTDPDDLNTGPKGYLKVDISVVGKGDSIKLPKSNDDEEDNIEEKNMLLPEGVPA
ERQRARFIFKVYRAEGLPKMNTRMTEKLKSMLQGEMRDLVDPYVEISFCGQKGCTSVRKH
SYEPSWNEEVIFTELFPPLSKRIKVQLRDKDNIKNSVIGTTFLDLDKISNSGDRAPAYKH
SHRHPRKRMKIGDLLVERNPGFLPTFGPTYVNLYGSPRNYTVVNEHSDLNAGLGEGVAFR
GRMLIGLSVQLVDMSAADGQGSSAVEVETIPQLSELGAGRIEDFFLFTSILEANMVSRTL
QDKQISFELTVGNFGNVIDGQNLSNKTRSNGDSDESDEETTSLLKGIKTQEDKEPDVRSM
TSPTLPITKDKDNYYYHLPFLEQKPCLYITSQWHDQKRRMYNSNIMHKIADKLDEGLQDV
QEMLKTDQDAPHRRLRGVVEELANGCASYTRLVKGTESGGGAALGRTRLDKERNKLCLRE
MDNITTEARKIRKQIKPSTMKDKHARVKILLNRIKFLADDPQSSVPDVFLWMICGMKRVA
YARIPARKILYSIREEESGQHCGKVQTVFLRFPGRRSIGPGGWSIQAKLEMYMWLGLAKH
KRDYLKGLPEGFEQTRPFGLKSPPTYITYKEKQVFQLRCHIYMARGLIAADDSGLSDPYA
KVIFATCTSTTQVMEETLNPTWDQTLVMEDVTLYGRAEELRDDPPVIIIEIFDRDVVGNN
EYIGRTMAKPLVKMSWEKYEKKFPPQLDWYQIYRGSTRAGELLASFELLQMPFDEQERRQ
VLWRSWCEMNDNSKNKISLFQVKTPKSLDDVPKVAETVTNEQGVKFPVPKGIRPLLAKHK
VEVLFWGLRDLKRVQLATVDQPRVDIQIAGKAVSSCIIPNYKKNPNFAEPVRFIDEVDLP
ENEYLCPPITITVVDCRAFGREVLVGTHIISSLSKFIFRPPEKSEMYTAAIRLFTDTLQG
IKGRKQHMAAISRSDVNITLAGSQGGLQHLSPPPPGGMVEIAIDENGAKEEGEEDDPLDE
AALDWWSKYFASLDTLNEEKARQEAEEGPHDLYDEDERSPDDPNLPNVPKDDGYLSRLKR
LTISRNDDDVPDQGENGGVGGKKKVGKRLFKGAVGAVKLARKGLASPAKKWKNKKLPIDE
LRLYDTELENVTEFSGFHDLLHSFDLFRGKREDDADDLLDQKRIVGTFKGAFKIYRLPLA
EWIEQPDPLVGMFKSLPSNEPLHVMVRVYVVRANDLHPTDPNGKADPYLMVLLGNQKVND
KENYVSKQLNPMFGKTFEFEATFPMESVLTVQVYDWDLLSADDLIGETKLDLENRFYSKH
RATCGIAEKYSIFGYNQWRDPMKPSQILTKLCKDYKIEGPHFSPGKVKVGKKIYTGSIEL
EDENGHKKPTDEHVALVALRNWHEIQKVGCHLAPEHVETRSLFSPEKPGIEQGRLELWVD
MFPMDMPMPGPAVDISPRKPKGFQLRVIIWNTEDVVLQDDDFFTGEKASDIYVKGWLVGE
DKQETDIHYRSLTGEGNFNWRFIYPFDYLIAEEKIVITKKESLFAWDETEFKIPPRLNLQ
VWDADHFSADDFLGSLTLDLTHFPRGAKSAAKCSLNMATEEDDSSGKDIPMISLFKQRRI
KGWWPFTAKNDQDELEITGKVEAEIVLMTADEAEKNPAGYGRDEPDPLEKPNRPDTSFVW
FMNPLKSLRYLICTRFKWLIIKLFIVLLLTALLVLFVYSSPSWLMKKILGA
NT seq
6636 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaacagtgaaaatcggaacgctcagtggcttgaaaggcaaagggaatcgccaa
gcgaaaataacattcagagatcacagctatgtcacacagaccattgaagattgcgaaagc
gaggcggatttttatgagacattcgaatggccggtggcgagtgctattgagcccacagaa
cagattcacattcaattctacaatttcagcaaagtattctcaaacagaccgatcggttcg
ttcgatatgctgctgcaagaagttgtagcgaggggtcgtctcgccatcaccgaaacatta
ctggattcaaacaatactgcgttatcggcgctcgtatctctcgacttcaaatatgtcgcc
ccagatggaaaggtcggtgattgggcgatggatgagtttataccagagattgtggtggct
gacgatttccaaagtattcacaccacagaaacaacaggaagcaagaaaagtttgcttcat
gacgtcatgttccgaggaggtcggacaccaaatgatatgagatacgaattagttgatgag
tcttcgtcgctaattaacccaccaacctcacactgggaggagagaacgagagagaagaac
gcaatctcccgacgaccgattgatttatggaagaaaggagcagggttcacgaccccggaa
gttaacagaagtgctgctgccattctcagtccgaaatcgaaatggaaacattttgctcaa
aaagctgcaacaatgaatccaggcgagggcgctatttcaagttctacaccagtactccct
gacggtgacgtcactaagtttccaatatcgatgacgtcatttcggaagaaatcagctgct
gcaatcggaactcagagacacgactcttctcagctctcaatactgtctgcgttcagtggc
aaaacaaaaggaatactgaaaggattccgaggtaaacagagaccgcctgacgatacggac
ggagctgttattattggaaatcaagcggctttggcagatgggatccgacaatcgcgtggc
gaacccaagatcgaaattgacacagtatcgatcgcatcaatgcaaatggtggaggagaat
gtgacgaacaaacgatcaaaaccagagatccggtttgaaccagtggggatgagaccccag
gattttcaggtgtcggtcagtgtgatcgaagcccgacaacttagcggcacaaacatggat
cctgtagttctagtgcaagtcggggatgacaagaaatacacgtcaaagaaagaatcgacg
aattgtccttactataacgaagtctttgtgttcgactacaacatcccaaagcaaacgttg
tttgataaaatgatccagttgacggttctgcactctcgtaacattgttcgtagtggaaca
ctcgttgggacattcaaaatggacgttggaactgtctacgccaacaatgaccatatgttc
ttccacaagtgggcggtattaaccgacccagatgacttgaacaccggaccgaaaggttac
ttgaaggtcgatatctctgtcgttgggaaaggagacagcatcaagcttcctaagtctaac
gatgacgaggaagataacattgaagagaaaaacatgctcctgcccgagggagtcccagct
gaacggcagagggcgaggtttatcttcaaagtctacagggcggaaggtttgcccaagatg
aacacaagaatgactgagaagctcaagtccatgctacagggggagatgagagatctggtc
gatccgtacgtggaaatatcgttctgtggacagaagggctgcacttctgttcgcaaacat
tcgtacgagccatcttggaacgaagaagtaattttcactgagttattccctcccctctcc
aaacgaatcaaggtccaactcagggacaaggacaacataaagaacagcgtcattggaacg
acctttcttgaccttgataaaatttcaaattcgggagatcgagcaccggcgtataagcac
tcacatagacatccccggaaacgaatgaaaatcggagatcttctggtcgagaggaacccg
ggttttctcccaacgtttggaccgacctatgtgaacttgtacggtagcccacgtaactat
accgtagtgaacgagcattccgatctcaatgcaggactcggagaaggagtcgctttcagg
ggccgaatgttgatcgggttgtcggtccagcttgttgacatgagcgcagcagatggacaa
ggatcctccgctgtcgaggtcgagacgattccgcaactgtcagagcttggcgccggcaga
attgaagatttctttcttttcacttcgatattggaagcgaacatggtcagtcgaactttg
caggataaacagatctcttttgaattaactgttggcaacttcggcaacgtcattgacggt
cagaacctcagcaacaagactcgatctaacggtgactcggacgagtcagatgaagaaact
acgtcactactaaaaggaatcaaaacacaggaagacaaagagcctgacgtcagatctatg
acgtcaccaacgcttcctatcaccaaagacaaagacaactactactaccatctacccttc
ctggagcagaaaccctgtctttacatcacgagtcaatggcacgaccagaaacgcagaatg
tacaattcgaacatcatgcacaagattgctgataaactggacgaaggcctgcaagacgtc
caggaaatgctgaaaacagaccaagacgctcctcatagaagactgaggggcgtggtcgaa
gaactagccaatgggtgtgcgtcatacactaggcttgtgaaaggaacagaatctgggggc
ggagctgcactaggaaggacaaggctggataaagaaagaaataaactctgcttgagagaa
atggacaacatcacgactgaagcccgcaagatcaggaaacaaatcaaaccttcaacgatg
aaggacaaacacgcaagagtcaagattttgctaaaccggataaaatttctggctgatgat
ccacaatccagcgttccagatgttttcctttggatgatctgtggaatgaagagagtcgcg
tacgccaggatacctgcgaggaagatcctgtactccataagagaagaggaatcgggccag
cattgcgggaaagtgcagactgtgttccttaggttcccaggccgtcgcagcatcggtccg
ggtggttggagcattcaggcaaagttggagatgtacatgtggttaggattggccaaacat
aagcgagactacttgaaaggtctacctgagggcttcgagcaaaccagaccttttggacta
aagtcacccccgacatacatcacgtataaagaaaaacaggttttccagcttcgttgccac
atctacatggctcgaggtctgatcgccgccgatgactccggtctttccgatccttatgca
aaagtcatctttgctacgtgcacttccaccactcaggtgatggaggagactctcaacccg
acctgggaccaaaccctcgttatggaggatgtgacgttgtacgggcgagcagaggaactg
agggatgatccgcctgtgattatcattgagatatttgacagagatgtcgtgggtaacaac
gagtacattggtcgcacaatggcgaaacctctcgttaaaatgagttgggagaaatatgag
aagaagtttcctcctcagctagattggtatcagatctatcggggaagcactagagcagga
gaactactggcatcctttgaactgttgcagatgcccttcgacgagcaagagcgccgccaa
gtgttgtggagatcttggtgtgaaatgaacgacaattcgaaaaacaagatctccttgttt
caggtgaagactcctaaatctctggatgacgttcccaaggtagcagagacagtgacgaat
gagcaaggggttaagttcccagtgccgaaaggaatcagacctctgctggcgaaacataaa
gtcgaggttttgttctggggactgcgggatttgaagcgcgtacaactggctacagtggat
cagccgagagtggatatccagattgcagggaaggcggtcagttcttgcatcattccgaat
tataagaagaatccgaactttgccgaacccgtcagatttattgacgaggtcgatctgccc
gagaatgaatacctttgcccacctatcaccatcacagtggttgattgcagagcattcgga
cgtgaagttctcgttggaacccacatcatcagcagtttgtcaaagttcatcttcaggccg
ccagagaaatctgagatgtacacagctgcaatcaggcttttcacggatactttgcaaggg
atcaaaggtcgcaaacaacatatggcggcaatttctagaagtgacgtcaacattacgctt
gctggatcccaggggggactccaacacttatcaccaccgccccctggtggaatggtggag
atagcaatagacgaaaacggtgcaaaggaagaaggcgaagaagacgacccactggatgag
gcggctttggattggtggagcaaatactttgcttcattggatacattgaatgaggaaaaa
gcacgccaggaagcggaagaaggtccccatgatctgtacgatgaggatgaacgctcgcct
gatgatccgaacctaccaaacgtacctaaggacgatggttatttgagtcgattgaagaga
ttgacgatatccaggaacgatgatgatgttccagaccaaggagagaacggaggcgtggga
ggaaaaaagaaagtcggaaaacgcttgttcaaaggtgccgtgggagctgtcaagctcgca
agaaaaggtcttgcttcacctgcaaagaaatggaaaaataaaaaactgccaattgatgaa
ctgaggctgtacgacacagagcttgaaaacgtcacagaattctccggcttccacgacctc
ttgcactcgtttgatcttttccggggcaagagggaggatgatgccgatgacctcctggat
cagaagagaatcgttggaactttcaaaggagcttttaagatctacaggctccccctagcg
gaatggattgaacagcctgatcccctagttggaatgttcaagagtctcccaagcaatgaa
ccacttcatgtgatggttcgtgtctacgttgttcgagcgaacgatcttcatccaaccgat
cctaacggcaaagctgatccatatctcatggttttactcggaaaccagaaagtcaacgat
aaagagaattatgtttcgaagcagctgaatccaatgtttggaaaaactttcgaattcgaa
gcgacgtttcccatggaaagcgttctcactgttcaagtctacgactgggatcttctgagc
gccgatgatctgatcggtgaaaccaaactagatcttgagaatcgattctacagcaaacat
cgggcgacgtgtggaatagcggaaaagtacagcatctttggttacaaccaatggcgagac
ccgatgaagccaagtcagattttgacgaaactttgcaaagactacaagatcgaaggaccg
cacttctctcctggcaaagttaaagtcgggaaaaagatctacacgggctctattgaactt
gaagacgaaaacggccacaagaaaccaacagatgagcacgttgctctggttgccctgaga
aactggcatgagatccagaaagttggatgccatcttgcccctgagcatgtggagacgaga
tcgttgttcagtccagagaaaccggggatcgaacagggtcgacttgaactgtgggttgac
atgtttccgatggatatgcccatgcctggcccagctgtggatatttcaccaaggaaaccg
aaaggctttcagcttcgagttatcatttggaacacagaagacgttgttctacaagacgac
gatttttttactggagaaaaagcatccgatatttatgtcaaaggttggttggttggggag
gacaaacaagagacagacatccactaccgttcactcactggtgaggggaatttcaactgg
aggttcatttacccgttcgattacttgatcgctgaggagaagattgtcattacaaagaag
gaatctctctttgcctgggatgaaacagagtttaagatcccacccagactcaacttacaa
gtttgggacgccgatcacttctcagccgatgatttcttgggttctctcactctagatctg
acccatttcccaagaggagcaaaatcagcagccaaatgcagtttaaatatggcaacagag
gaagatgattcgagcggcaaagatattccgatgatttctctgttcaagcagagaagaata
aagggatggtggccgttcactgccaagaatgaccaagatgaattagagataacgggtaaa
gttgaggctgaaatagttttgatgacggccgacgaagccgagaagaatcccgcaggatac
ggaagagatgagccggatccgctggagaaaccgaaccgcccggatacatcgttcgtctgg
ttcatgaatccactcaaatccctccgatacctaatctgcacaagattcaaatggttgatc
atcaaactgttcatcgttcttcttctcactgctctactcgtcctctttgtttactcatcc
ccgtcctggcttatgaagaaaatattaggagcctaa
DBGET
integrated database retrieval system