Styela clava (leathery sea squirt): 120329201
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Entry
120329201 CDS
T07291
Name
(RefSeq) beta-1,4-galactosyltransferase 2-like
KO
K07967
beta-1,4-galactosyltransferase 2 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00052
Galactose metabolism
sclv00510
N-Glycan biosynthesis
sclv00513
Various types of N-glycan biosynthesis
sclv00514
Other types of O-glycan biosynthesis
sclv00515
Mannose type O-glycan biosynthesis
sclv00533
Glycosaminoglycan biosynthesis - keratan sulfate
sclv00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sclv01100
Metabolic pathways
Module
sclv_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120329201
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120329201
00513 Various types of N-glycan biosynthesis
120329201
00515 Mannose type O-glycan biosynthesis
120329201
00514 Other types of O-glycan biosynthesis
120329201
00533 Glycosaminoglycan biosynthesis - keratan sulfate
120329201
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
120329201
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sclv01003
]
120329201
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
120329201
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
120329201
2.4.1.90 N-acetyllactosamine synthase
120329201
Glycosyltransferases [BR:
sclv01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
120329201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
120329201
NCBI-ProteinID:
XP_039251674
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MSNKETESERLLIEAPTLEVTRQGTGNGTSLSVTDLTEIPYKWMCCNFRIRVVCIVLLLL
LQLPILGYYYVTSDNYIMKFTNSYKDVFMEEVFGQKVNTNLTTTQSMLFFSTATHQFTKS
NFSDETTVSSTTISTRNVFTTNADKTLSNFSPTLTTVINKAEEDTTVLKLQTNATTAVVT
TTQSTVANPTTVVSTSFPTTDSHYVAEDGSILSQCPPEPPNLQGPLAISFKDPPDSFEKT
VLNNPLVTEGGHAKPPLCLARHKLAIIIPYRDRVQHLQYFVEYMHPILQRQQLDYQIFII
NQAGHGKFNRAKLMNVGFLEALKLYPFTCFAFHDVDLVLEDDRSLYWCSDRPRHLSAGVD
KFNYVLPYSSIFGGVTLLSKEHMEAINGFSNEFWGWGGEDDDVYNRLNIKGFKIIRYPMN
IARYKMITHKHEKGNEANPRRFEMIRKTRLTYQKDGLNSIQYKVLSVEQQPLYTNVTVDI
LGPP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataaggagactgaatcagagcgtcttctgatcgaggctcccacactggaagta
accagacaaggcaccggaaacggaacttcattaagtgtaacagatttgacagagattccc
tataaatggatgtgctgtaactttcgaattcgggttgtctgcattgtattattactactt
ctccagctacctatacttggatattattatgtgacttctgataactatattatgaaattc
acaaactcttataaggatgtattcatggaggaagtatttggacaaaaagtgaacactaat
ttaacaactactcaaagtatgttgtttttctccactgcaacgcatcagtttacgaaatcg
aatttcagcgatgagactacagtcagttcaacaacaatttcaactagaaatgtatttaca
acgaatgctgataaaacactatcaaatttctcgccgaccttaaccactgtaattaataaa
gctgaagaagacacaaccgtgttgaaattacaaactaatgctacaacagctgtagtaaca
acgactcaaagtactgttgctaaccccacaacagttgttagtaccagttttccaactact
gattcacattatgttgctgaggatggttctatattgtcacagtgtcctccagaaccacca
aatttacagggaccccttgcaatttcattcaaagatccaccagatagttttgagaagaca
gttttaaataatcctctcgtgacagagggggggcatgcgaagccaccactttgtctagca
agacataaactggccattattattccatatcgggacagagttcaacatttacaatatttt
gttgaatatatgcatcctatattgcagaggcaacagcttgattatcaaatatttatcatt
aatcaggctggccacggaaaattcaatcgagcaaagttgatgaatgtaggatttttagag
gcactaaaactgtatccatttacttgttttgcgtttcatgacgttgatttagttttagaa
gatgatagaagtctttattggtgctcggatcgtcctcggcatttgtcagctggagtcgat
aaatttaattatgtattgccttattcctccatatttggtggtgtcacactattatcgaaa
gaacatatggaagcaattaacggattttcaaatgaattttggggttggggaggagaagac
gacgatgtctataacagattgaatattaagggatttaaaattataagatatccaatgaat
atcgcgaggtataaaatgataacacataaacatgagaaaggaaacgaagcaaatccgaga
aggtttgaaatgatcagaaaaacgagactaacatatcaaaaagatggactgaatagtata
caatataaggttttaagcgttgagcagcagcctttgtacacaaatgtcactgtcgatatc
cttggtccgccctag
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