KEGG   Styela clava (leathery sea squirt): 120329647
Entry
120329647         CDS       T07291                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 4-like isoform X1
  KO
K07967  beta-1,4-galactosyltransferase 2 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv00052  Galactose metabolism
sclv00510  N-Glycan biosynthesis
sclv00513  Various types of N-glycan biosynthesis
sclv00514  Other types of O-glycan biosynthesis
sclv00515  Mannose type O-glycan biosynthesis
sclv00533  Glycosaminoglycan biosynthesis - keratan sulfate
sclv00601  Glycosphingolipid biosynthesis - lacto and neolacto series
sclv01100  Metabolic pathways
Module
sclv_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    120329647
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    120329647
   00513 Various types of N-glycan biosynthesis
    120329647
   00515 Mannose type O-glycan biosynthesis
    120329647
   00514 Other types of O-glycan biosynthesis
    120329647
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    120329647
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    120329647
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:sclv01003]
    120329647
Enzymes [BR:sclv01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     120329647
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     120329647
    2.4.1.90  N-acetyllactosamine synthase
     120329647
Glycosyltransferases [BR:sclv01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   120329647
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 120329647
NCBI-ProteinID: XP_039252302
LinkDB
Position
Unknown
AA seq 396 aa
MALLKVNCTIRTLLVLVFAINVSMILVFRLYVLQIRQESIGNRKFQLSYYTTVETDTETH
TFTMAKENTMSSTARINGTEMINVNFTTELNVPAISNCIEYLGGSISVNYKSALQTFHNF
SNITQADITTYGELFLGNKEEGYKYKNSNNAVIFEPKNPNCQTAQNVAFIIPFRNRETHL
RLVVGHLIPVLQRQNIRFAFFIVTQNGNEYFNKGRLMNTGFEFASEVGKARNQAFDCYIF
HDVDLFVEHDSLLYRCGGGKEIDHLAPRIDKFKYVPYCCGMTVGGVIGFTEEQYRTVNGY
SNKYWGWGAEDDDMADRLELHDLGIRRPEGDLGKYTMMSHQRDSLNPINTGRFKILWDKN
KKFWNDGLGNLDTKITSVLRYPLFVNVLVDVGKPPT
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggctctgttgaaggttaactgcaccatacgaacactgttagtattggtttttgcaatc
aacgtgtcgatgatattagtatttcgtctttacgtcttacagataagacaggaaagcatc
ggtaataggaaatttcaattatcatattacactacggtggagacagatacagaaactcat
acgtttacaatggccaaggaaaatacaatgtcatcaaccgcaagaataaatggaaccgag
atgataaatgtaaattttactacagagctcaatgttcccgcgatttctaattgcattgaa
tatttaggaggatctatttctgtgaattataagtcagctctacaaacctttcacaatttt
tcaaatattactcaagctgatataacgacttatggggaattattccttggaaataaggaa
gaaggatataaatacaaaaattcaaacaacgcggtgatttttgaaccaaaaaatccaaat
tgccagacagcacaaaatgtggcttttataattccttttcgaaaccgagaaacgcatcta
cgactagtagtaggacatctgattccagttttacaaagacaaaatattcgctttgcattt
tttatcgtcactcaaaatgggaacgaatatttcaacaaaggtcgactgatgaacactggg
tttgaattcgcgagtgaagttggaaaagcgaggaatcaagctttcgattgttatatattc
catgatgtagatctttttgtcgagcacgatagccttctatatagatgcggcggtggaaag
gaaattgatcacttagccccaagaattgataagttcaaatatgttccatactgttgtggt
atgacagtcgggggagtcattggtttcacagaagagcaatacaggacggtgaacggttat
tccaataaatattggggatggggagctgaagatgatgatatggcggataggctagaacta
catgatttgggaatcagacgaccagaaggtgatttaggaaaatataccatgatgtctcac
caacgcgattctctgaatccgatcaacacaggaagatttaaaattttatgggacaaaaac
aaaaaattttggaatgacgggctcggaaatttagatacaaaaataacgtcagttttacgt
tatccactttttgtgaacgtcttggtagacgtgggaaaaccacctacctaa

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