Styela clava (leathery sea squirt): 120335598
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Entry
120335598 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: CAD protein-like
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00220
Arginine biosynthesis
sclv00240
Pyrimidine metabolism
sclv00250
Alanine, aspartate and glutamate metabolism
sclv01100
Metabolic pathways
sclv01240
Biosynthesis of cofactors
Module
sclv_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
120335598
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120335598
00220 Arginine biosynthesis
120335598
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sclv01002
]
120335598
Enzymes [BR:
sclv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
120335598
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
120335598
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
120335598
Peptidases and inhibitors [BR:
sclv01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
120335598
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
120335598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
Dala_Dala_lig_C
ATP-grasp
MGS
ATPgrasp_Ter
Amidohydro_1
ATP-grasp_3
RimK
Peptidase_C26
GARS_A
Motif
Other DBs
NCBI-GeneID:
120335598
NCBI-ProteinID:
XP_039259066
LinkDB
All DBs
Position
Unknown
AA seq
2254 aa
AA seq
DB search
MSECKEKPTTLVLEDGSKYNGFSFGEEADVAGEIVFQTGMVGYPESLTDPSYRRQVLVLT
YPLIGNYGIPADDDIDEYGLSKWFESQKIHVAALVVGECCEKYSHWSARQSLSNWLKKQG
IPGIMGIDTRQLTKHIRSQGTMLCKVLKGNASIEDSERLPFLDPNKINLVAEVSSNAPVT
YNPEGDVHIIAVDCGIKYNQIRCFCRRGAKVTVVPWDFNFQQLDHDGLFLSNGPGNPETC
LPTIEYIKTSVQLKKPKPIFGICLGHQLLALAINAQTRKMKYGNRGHNQPCKLEGTNRCF
ITSQNHGFAVDATTLPDDWSVLFTNANDNSNEGIVHKTLPFFSCQFHPEHMAGPEDLEVL
FDVFLEKVRLNKAGESDSKSMYESIHSSIVSNIPQPVTEKPPQKVLILGSGGLSIGQAGE
FDYSGSQAIKALREENIRTVLINPNIATVQTTKGLADKVYFLPITPQYVDQVIKSERPDG
ILLTFGGQTGLNCGVELQKSGILKEYNVKVLGTPVSSIEMTEDRKVFADKMLEIGEKVAP
SDAAYNLEAARKIAKKLGYPVLVRSAYALXGLGSGFANDESELDKIVQAAFAHXSQVFID
KSLKGWKEVEYEVVRDAYDNCITVCNMENVDPLGIHTGESIVVAPSXTLTNKDYNRLRTT
AIKCIRHLGVIGECNIQYAVNPESDEFYIIEVNARLSRSSALASKATGYPLAYVAAKLAL
GKSLLELRNNVTEQTTANFEPSLDYCVVKNSKMGLRKFHRVSTKIGSSMKSVGEVMAIGR
CFEEAIQKALRMVCRDWNGFSYDLAEVSDDDLSTPTDKRIFVLAAALRAEYSIDKLYDLT
KIDRWFLHKFQNIINMTRVLEGYKYVASLHDDFQPVPKEILLRAKQLGFSDKQIAVANKS
TETSYKNVVKSIXISPHVKCIDTLAAEWPAVTNYLYLTYNANESDTDFLGGHIMVIGSGV
YRIGSSVEFDWCAVQCITELRKTGIXNNQLNCNPETVSTDYDVCDKLYFEEITLEIVMDI
YEKEQPEGVILSMGGQLPNNIAMGLHRQQVRILGSSAESIDNAENRFKFSRMLDNVNISQ
PQWKELTTASSAEEFCDLVGYPCLVRPSYVLSGASMSVIHSPNELKEYLINAGQVSKEHP
VVISKFILEAKEIDVDAVAKDGEVIAMAVSEHVENAGVHSGDATLVTPPQDLNRATLEKI
DQIVCAIGIELEVNGPFNLQLIAKDNELKVIECNVRVSRSFPFVSKTLNYDFVAAATKVM
VNHPVETVGCVLEAERVGVKVPQFSFARLGGADVMXGVEMASTGEVACFGSSRXESYLKA
LQSTGFRMPKKNIFLSIGSYKHKAELLPSVRLLHRMGXCLFGSLGTADXYTEHGIEIKSV
DWPFDEASVRGSSDQQLSIMDRLADNQFDLVINLPMRNGGSRRISSFMTHGYRARRMAVE
YSIPLITDVKCAKLFVQALRDVGGEPKVQPRLDCITSRMLIKLPGLIDVHVHVREPGQTH
KEEYSTCTASALAGGITMILAMPNTSPAVINEETIKLTKSLAEAGARCDYGIYMGAAKEN
ALDAASASEYAIALKMYLNDTFTTLKMDNMTYWIKHFEAWPKNLPIXVHAERQTMAAVLW
LVELYTRPVHFCHVARAEEIQMLRLAKDRGLPITCEAAPHHLFLTEDDLDTIGHGRGRVC
PSLGTKADQDALWENLDIIDCFATDHAPHAVSEKDRQQPLPPPGFPGLETMLPLLLNAVN
EGRLTLEDLFLRLHTNPMKIFNLAPQPNTYVEVDMNEEWIIPSEMPFTRSKWTPFAGIKV
RGAVKRVVLRGEVAYIDGKVLLRPGSGMDVKKTTQXTPVVSNVQKTTALKVSVPEMPFTT
QQISPRPGTSEGQLGLPPKVHRVSEPPSGLPIPHFGPVGDAGSGLLMTKRIESDKGMTPQ
NANVLRGAILGSGGISGNLEGKLHPQHGLVGSDVLKVSQFTKEQLHHLFNVAHALRNMVQ
REKYLGNILSGRVMASLFYEASTRTMCSFHAAMHRLGGSVIAMNKASSSVLKGESLTDSV
QVMSGYSDIIVLRHPEPGAVERVARHVRKPVISGGDGVGEHPTQALLDVFTIREELGTVN
GMTITIVGDLKNGRTVHSLARLLTLYRVSLRYISPESLEMPKDTCDYVTSRGIPQRVYSS
LEEALPDTDVLYMTRIQKERFQSNEAYEKAVGKFVLTPHLMTKAKQNMVVMHPLPRLGEI
KESVDSDPRAAYFRQAECGLYIRMALLCMVLGKY
NT seq
6765 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtgcaaagaaaagccaacaactcttgtacttgaagatggatcaaaatataat
ggcttttcttttggtgaagaagcggatgtagctggtgaaattgtatttcagactggaatg
gttggatatccagaatctcttactgatccttcctatagaagacaggttttggttcttacc
tatccacttattggtaactatggaattccagcagatgatgatatagatgaatatggactt
tcgaagtggtttgaatcacaaaaaatacatgttgctgctctcgttgttggtgagtgctgt
gaaaagtacagccattggtctgccaggcaatcgttgtccaattggctaaaaaagcaggga
atcccaggtataatgggcattgatacaaggcagctcacgaaacacattcggtcacaaggc
acaatgctttgtaaagtgttaaaaggtaatgctagtattgaagacagtgaacgattgcca
tttttggatccgaacaaaatcaatcttgtcgctgaggtttcgtcaaacgccccagttact
tataatccagaaggagatgtccatattattgcagtagattgtggaataaagtataaccaa
ataagatgcttttgtaggagaggagcaaaagttacagttgtgccgtgggatttcaatttt
cagcaattagatcatgatggactttttctcagcaacggccctgggaatccggaaacatgt
ttgccgactatcgaatatatcaaaacgtctgtacaactcaagaagccgaaaccaattttt
ggaatttgtctcggacatcagctactcgctcttgcaataaatgctcaaacaagaaaaatg
aaatacggaaaccgtggtcacaatcaaccttgcaagcttgagggaacaaacaggtgtttt
ataacatcgcaaaaccatggattcgctgtggatgcaactacacttccggatgactggtct
gttctctttacaaatgcaaatgataactcaaacgaaggtattgttcacaaaactttgccc
ttcttcagttgtcaatttcaccctgagcacatggctggtccggaagatcttgaagtgcta
tttgatgtatttttagagaaagtgagattgaacaaagctggagaaagtgactccaaatct
atgtatgaatccatacattcctctattgtaagtaacattccgcaaccagtcacagaaaag
ccaccacaaaaagttctgattctcggttctggaggtttgagcataggccaggcaggcgaa
tttgattattctggttcgcaagcaatcaaggccttacgagaggaaaacattagaactgtt
ttgatcaaccccaatattgccacagtacaaacgacaaaaggcctagctgataaagtatat
ttcttgccgattactcctcaatatgtcgaccaggttataaaaagtgaaagaccagatggt
atattactaacttttggtggacaaaccggtttaaattgtggcgttgaattgcaaaaaagt
gggattttgaaagaatataatgttaaagttcttggcacgcctgtttcttctattgaaatg
acagaagatagaaaagtgtttgctgataaaatgcttgaaattggagagaaagtcgctccg
agcgatgcagcatataatctagaagctgcaagaaagatcgcaaagaagcttggttatcct
gtactcgtcagatctgcttatgctctgnngggattaggttctggatttgcaaatgatgaa
agtgaacttgacaaaattgtgcaagcagcgtttgctcacnnatctcaagtgtttattgat
aaatctttgaaaggttggaaagaagtagaatatgaagtagtacgagatgcttatgacaac
tgtatcacagtttgcaacatggaaaatgtcgatcctctcggcattcacactggggaatcg
attgttgtagcacctagtncaactctaacaaataaggactacaatagacttcggactaca
gcaatcaagtgcattcgtcacctcggtgtcattggcgaatgcaatatccaatatgcagtg
aatcctgaatctgatgaattttatatcattgaagtgaacgccagactttcaagaagttca
gccttagctagcaaagcaaccggctacccattggcctatgtggctgccaaacttgccttg
ggaaaatctttacttgagcttcgtaacaacgtaactgagcaaactacagcgaattttgag
ccgagtttagattactgtgttgtcaaaaattccaagatgggtttgagaaaattccataga
gttagcactaagataggaagcagcatgaagagtgtcggtgaggtaatggcgattggacga
tgtttcgaagaagcaattcaaaaagcactgagaatggtttgccgagattggaatggattt
tcatatgatcttgcagaagttagtgacgatgatttatctacaccgacagataaaaggatt
tttgtgctcgctgctgcactcagagctgaatatagcatagataagttatatgacttgact
aaaatcgatagatggtttttgcacaaatttcaaaatatcattaacatgacaagggttctt
gaaggttacaagtacgttgcatctctgcacgatgattttcaaccagtaccaaaagaaata
ctacttcgagcaaaacagttaggattttctgacaagcaaatagctgttgcaaacaaatca
acagaaacttcatacaaaaatgtcgtaaagagtatannaatatctccgcatgtgaaatgt
attgatactttggccgcagaatggccagcagttacaaattatctctatttgacatataat
gcgaatgaaagtgataccgattttctgggtggtcatatcatggtaattggttccggtgta
tatcgcataggtagcagtgtggaatttgattggtgtgctgtacaatgtatcactgaactg
cgaaaaactgggatataaaacaatcagttgaattgcaatcctgagactgtaagcactgat
tatgatgtttgtgacaagctatattttgaggaaatcacacttgaaattgtgatggatatc
tatgaaaaagagcagccggagggtgtcatccttagcatgggaggtcaattgccaaacaat
attgcaatggggcttcacagacagcaagtaagaattttgggatcatctgctgaatcaatc
gacaatgctgaaaatcgatttaaattttcgagaatgctggacaatgtcaatattagtcag
ccacaatggaaagagttgacaacagcttcctctgcagaagagttttgtgatcttgtggga
tatccttgccttgtaagaccgtcctatgttctcagtggtgcttccatgtctgttattcac
tcacctaacgaactgaaagaatatcttataaatgcgggccaggtttctaaagaacatccg
gtagtaatatctaaatttattttggaagccaaagaaatagacgtagatgctgttgccaaa
gatggagaagtgattgcaatggcagtttcagaacacgtagaaaatgctggcgtgcattct
ggtgatgcaacattggtcacaccacctcaggatttgaaccgagcaactctagaaaagatt
gatcaaatcgtctgtgccattggtattgagctcgaagtgaatggccctttcaatttgcaa
ctcatagcaaaggataatgagttgaaagttattgagtgtaatgttcgtgtatcaaggtca
tttccttttgtatctaagactctgaattatgattttgttgcagctgcaactaaagtaatg
gtgaatcacccagttgaaactgtaggttgtgtactggaggcagaaagagttggtgtgaaa
gttcctcaattctcttttgctagattaggtggcgctgatgtgatgnctggtgttgaaatg
gcatctacaggtgaagttgcatgttttggaagcagcaggngagagtcttatttaaaagcg
ctgcagagcactggattccgaatgccaaagaaaaatattttcttgtcaattggaagttac
aaacacaaagctgaacttctaccatcagtccgattattgcatagaatggggtaatgcctt
tttggtagccttggtactgctgacntttacactgaacatggaattgaaattaaatcagtt
gattggccttttgatgaagcaagtgtcagaggtagttctgaccagcagctgtcaataatg
gaccgtttagctgacaaccaatttgatcttgtaattaatttacccatgcgaaatggcggt
tcaaggcgcatttcatcgttcatgacgcatggatatcgtgctcgtagaatggccgtcgaa
tattctattcctctaataacggatgtgaaatgtgcaaaactgtttgttcaagctttgaga
gatgttggtggggaaccgaaagttcaaccccgtcttgactgcatcacttcccgcatgtta
attaaacttcctggtcttatagatgtgcacgtccacgtacgagaacctggtcagactcat
aaggaagaatattcaacttgtacagcaagtgctttggctggtggaatcaccatgatctta
gcaatgcctaataccagtcctgcagtgattaatgaagaaaccataaaacttaccaagagc
cttgccgaagctggtgcgcgatgtgactatggaatttacatgggagcagcgaaagaaaat
gccttggatgccgcgagtgcaagtgaatatgcaatcgcccttaaaatgtatttgaatgac
acttttactacgctaaaaatggataacatgacatactggataaagcattttgaagcatgg
cctaaaaatcttccgattngcgttcatgctgaaaggcaaacaatggctgctgtattgtgg
ttagtggaactgtacacaaggcctgtgcatttttgtcatgttgctcgcgcagaagaaata
cagatgcttcgtttggctaaagatcgtggtttacccattacttgcgaggctgcaccacac
cacttattcctgactgaggatgacctggacaccataggtcatggacgaggtcgtgtttgt
ccatcactcggcacaaaagcagatcaggatgcgttatgggaaaatttggacattattgac
tgtttcgcgacggatcatgctccacatgcagtttctgaaaaggatagacagcaaccattg
ccaccacctggattccctgggcttgaaactatgctaccgctcctgctaaatgcagtaaat
gaagggcgattaacccttgaagacttatttttacgattgcacactaatccaatgaaaatt
ttcaacttggctccacaacccaatacctatgttgaagtagacatgaatgaagaatggatc
ataccatctgagatgccgttcactagatctaaatggacaccatttgctggtattaaagtg
agaggtgccgttaagagggtggtcttgcgtggagaggttgcatatattgatggtaaggtc
cttttacgtccaggttctggcatggatgttaaaaagactactcaanccaccccagtggtt
tcaaatgtacagaaaactacagccttaaaggtttctgttccagaaatgccttttactact
cagcaaattagccccaggcctggtacttctgaagggcaactcggattaccacctaaagta
catagagtatcagaaccacctagtggcctaccaataccacattttggaccagtcggtgat
gcaggttctggtttattgatgacaaagagaattgaaagtgacaaaggtatgacacctcaa
aatgcaaatgtgcttaggggagctatattgggaagtggaggaatatcgggtaatttggaa
ggtaaacttcatcctcaacatggtttggttggttctgatgtattgaaggtttcccaattc
accaaagaacaacttcaccatttattcaatgtggctcatgctcttcgtaacatggtacaa
agagagaaatatcttggaaacattctaagcggacgagttatggcatctttgttttacgaa
gccagcacgagaacaatgtgctcttttcatgctgcaatgcatcgcttaggtggatccgtt
attgcaatgaacaaagcgtcatcatctgtgttaaaaggtgaatctttaaccgattctgtg
caagtcatgtctggttactctgacattattgtgttgcgccatccagaaccaggagctgta
gaaagagttgcaaggcacgtcagaaaacctgtcatcagcgggggagatggagttggagaa
caccctactcaagctttgctcgatgtcttcactattcgagaagaacttggaacagtcaat
ggaatgactataaccatagttggagatttgaagaatggtcggactgttcattcacttgct
cgtttgctaactttgtatcgtgtcagtcttcgctatatttcaccagaatcattggaaatg
ccaaaagacacttgcgactacgtcacatccagaggaattccacaacgtgtttattcgtct
cttgaagaagctttgcctgatactgatgttctgtacatgactaggattcaaaaagaacgt
tttcagtcgaacgaagcatatgaaaaagcagtcggaaaatttgtgctcactccacatttg
atgacaaaagccaagcaaaacatggtggtcatgcacccactaccaagacttggtgagatc
aaagaatctgttgacagtgatcctagagctgcttacttccgccaggccgagtgtggactg
tatatcagaatggcattgttgtgcatggttcttggaaagtattga
DBGET
integrated database retrieval system
