Styela clava (leathery sea squirt): 120336324
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Entry
120336324 CDS
T07291
Name
(RefSeq) bile acid receptor-like
KO
K08537
farnesoid X receptor
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120336324
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sclv03310
]
120336324
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120336324
Nuclear receptors [BR:
sclv03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
120336324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120336324
NCBI-ProteinID:
XP_039259919
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All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MMASSQFVPSPVHHYPHFDCVEQPGVIVPPSSSSALTIPCSNPSLSHSPCPECALHSTIL
QSMTFNMNSNDYTACQHLHASASCSSCYSNFQLQQQRAEMGHGHRSHPVFRGPCGHMQQS
YEPRNTQIHPNGSYQNLQFHDWSRPVSTTDNGVFLPPPPNITPTSNCSDVREYSSMTSSG
ILTLPSPTFSIPPISPFLPNSITNIKEYDLTSIPSGESRNPAYLQIDVSNQRNSIPTNQN
TKTESLPSISGMQITEQESKPDIKIEKPDSNKRKLQKTSSDKKKSKGGENKGPEVRKRQP
EDLCQVCGDRASGYHYNALTCEGCKGFFRRSITNKTSYKQGCKQGGNCEMDTYTRRKCPH
CRLKKCKEVGMLEECLLTEIQCQSKRRRRKQKQEQNDEVKQQDETSQSTSVTSPGGQSSV
ASSPWGSDSSQNGDNGVSLTLTDEETKLIETVSEAFKHYKINPDIVKRWEKYINKESKTT
CRLSDITTVHVQVLVEYAKSLPGFITLDPEDQIALLKGSVFEAMLLRNSCGYHHLTREIN
IPAILDEIGIEVNKFRALLDFFACIGKVQMDEIEYALLIAIVVFNSDYPYVKNKAIIEEL
QDQYLSVLAKYSLTREPVRPSIFAKILATLTEIRSLSHFNAEIVTSWKKRGALTPLLCEI
WDLD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaagcagtcaattcgttccatcacctgttcatcattacccgcattttgattgc
gttgaacaacccggagttattgttcctcctagttcttcctctgctctaacgattccgtgt
tcgaatccaagtctatcccactctccttgtccagaatgtgctcttcattcaacaatctta
cagtcaatgactttcaatatgaattcaaatgattatacagcatgtcagcatctgcacgca
tcagcatcatgttccagttgttactcaaactttcagttgcaacaacaaagagcagaaatg
ggacatggacatcggagtcacccagtctttcgaggtccgtgcgggcatatgcaacaaagc
tacgaacctaggaatacacaaatacacccgaacggatcttatcaaaatttgcagtttcac
gattggtccagaccggtgtccactaccgataacggtgtatttctcccaccgcctccaaat
attacacctacgtcaaactgttctgacgtcagggaatattcatcaatgacgtcatcggga
atattaaccctcccgtcgccgacgttttcaataccccccatttctccatttttgccaaat
tctatcacgaatattaaagagtacgacctcacgtcaatacctagtggtgaatcacgtaat
ccagcatacttacaaattgacgtatccaatcaacgcaactctattcccacaaatcaaaac
acaaaaactgagtctctacctagtatatcaggtatgcaaataacagaacaggagtcaaaa
ccggatattaaaattgaaaaaccggatagcaataaaagaaaactacaaaaaacttcttcg
gataaaaagaaaagcaaaggcggtgaaaataaaggaccagaggttcgcaaacgtcaacct
gaagatctctgtcaagtgtgcggcgatcgggcttctggttatcactacaatgcgttaaca
tgtgaaggatgtaaaggatttttccgaagatcgatcacaaataaaacttcatataaacaa
gggtgtaaacaagggggtaactgtgagatggacacatacacaagaagaaaatgtcctcat
tgtcgattaaagaaatgtaaagaagtcggaatgcttgaagaatgtcttcttactgaaata
caatgtcaatcaaaacgacgaaggcggaagcaaaaacaagagcaaaacgatgaggtcaag
caacaagatgaaacgtcacaaagcacaagtgttacatcacctggtggtcagtcatccgta
gcatcatcaccatggggatcagatagctcacaaaatggtgacaatggggtttctctcacc
ttgactgacgaagaaactaaattaatcgaaacggtttcagaagctttcaaacattataaa
atcaaccccgatattgtcaagagatgggaaaagtatataaataaagaatccaaaaccacg
tgcagactatcagacatcacaacagtacacgtgcaagtattggtcgaatacgcgaagagt
ttaccaggtttcataactctcgatccagaagaccaaattgccttattgaaaggctctgtt
ttcgaagcaatgctgttgcggaattcatgcgggtatcatcatttaacaagagaaatcaac
atccccgccatattggatgagatcggtattgaagtcaataaattccgagctttgcttgac
ttctttgcttgcatcgggaaagtacagatggatgagatcgagtatgcattgctgattgcg
attgtcgttttcaattcagattacccttatgtcaagaataaagccattattgaagagtta
caagatcagtacctgagtgtattagcaaaatacagtctaacaagagagccagtccggccg
tcaatttttgcaaaaattctggcaactctcacagaaatccgatcgttgagtcattttaac
gctgaaattgtgacgtcatggaagaagcgaggagcgttaacacctttgttatgtgagata
tgggacctggattag
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