Styela clava (leathery sea squirt): 120340822
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Entry
120340822 CDS
T07291
Name
(RefSeq) sodium-dependent noradrenaline transporter-like
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120340822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclv02000
]
120340822
Transporters [BR:
sclv02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120340822
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120340822
NCBI-ProteinID:
XP_039265128
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MSASFISNNNNEKESDNSDTIVRYSSRGMSEDSECELLRKFSTDGNADGDVFFEGFDPRT
SGDSATGLLVSSGGDVESLREKEREQWDKKIDYILSMVGFAVDLANVWRFPYLCYKNGGG
IFLIPYTIFLLLAGIPLFFMELGLGQFNKQGPVTIWKICPLFKGIGYAMMLITLYVMFYY
TCIIAWSVYFIARSLTSFLPWTCCGNAWNTANCREQLGNITTNPICDERRNASLLNSTFV
QPNLTREVDETDIFKHTPASEFYYREVLHVHESRGIDDLGVPRWELAICLFIVVFLLFAV
IARGVRTSGKVVWVTATMPYIVLFILMIRAVTLPGATLGIQYYLSPNITRLGDVEVWTDA
ATQIFYSLGVGFGVHMTFASYNRFDNNIRFDAIVTSLINCCTSFLSGFMIFSVLGYMAVK
NNVDIDKVATDGPGLVFVVYPEVISQIPGAPFWSFVFFVMLLTLGIDSAMGAMEALVTGI
SDDIMFVKRHRIFFVAGLNIFVYFLAFLNITNGGIYILTLLDTHSAGTSLLFCVFLESTV
VAWVYGVDRFSEDIEQMLGYIPNVLWRVCWKFISPAFLLFIVIMSIANYSSMEYGSYKFP
SWADTVGWLIAGSSMILVPCVAIYKLSVLPGNFKQKLALSVSPEQDHKSIIEGRLTVKQS
QLKHWTAI
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctagctttatttcgaacaataacaatgaaaaagaatcagataacagtgacaca
attgttcgatattcgtcaaggggcatgagtgaggattctgaatgtgaactactgagaaag
ttttcaacagatgggaatgcagatggcgatgtgtttttcgaaggattcgatccacgaacc
agtggtgattcggctactggattgctggtcagctcaggtggtgatgttgaaagtttgcga
gaaaaagaaagagaacaatgggataagaaaattgattacattttatccatggtcggattt
gctgttgatcttgcaaacgtgtggcgatttccatatttatgttacaagaatggaggagga
atatttctcatcccgtacacgatatttctattgctggcaggaattcctttgtttttcatg
gagcttggacttgggcagttcaataaacaagggccagtcacaatatggaaaatttgccca
cttttcaaaggaatcggatacgccatgatgctgataacattgtacgttatgttttattat
acgtgcataatagcctggtcagtatatttcatagctcggtcgttgacgagttttttacct
tggacctgttgtggtaatgcttggaatacagcaaactgtcgtgaacaacttgggaatatt
acaactaatccaatttgcgatgaaagaagaaatgcttcattacttaacagtacttttgtg
caaccaaacttaacacgggaagttgatgaaaccgatatatttaagcatacacctgcttca
gaattttactatcgcgaagttctacacgttcatgaaagcagaggaatcgatgatttggga
gttccaagatgggaattggcaatttgcctatttattgtagtattcttactgtttgctgtc
attgcccgcggtgtacgaacatcagggaaagttgtgtgggtgactgcaacaatgccgtac
attgttttattcatattgatgatccgagcagttacgttacctggtgcaacattaggaatt
cagtattatttgagtccaaatattacaagactcggtgatgtggaggtttggactgatgct
gccacacaaatattctattcccttggagttggatttggagtccacatgacatttgcaagc
tataaccgttttgacaacaatatcagatttgatgcaatcgtgacgtcgcttatcaattgt
tgtacaagttttttgtccggtttcatgattttctcagttctgggatatatggcggtgaaa
aacaacgtggatattgataaagttgccacagacggtcctggactggtattcgttgtatat
cctgaagtcatttcgcaaattcctggagcaccgttctggtcatttgtcttctttgtcatg
ttgctaacgttgggaattgacagtgcgatgggagcaatggaagctctagtcaccggtata
agcgatgacatcatgttcgtcaaaaggcatagaatattttttgttgccggattgaatatt
ttcgtctactttcttgcattcttgaacataacaaatggtggaatctacattttaactctc
ctggacactcattctgctggaacatctcttctgttttgtgtcttcttggaaagtaccgtt
gttgcgtgggtttacggcgttgatcgattttctgaagacattgaacagatgctgggatat
ataccaaacgttttatggagagtgtgttggaaattcattagtccggcatttttgttgttc
atcgtcatcatgagcatagcgaactattcatctatggaatatggttcgtataagtttcct
tcttgggcagacacagttggatggttaatcgcgggatcgtcgatgattttggtaccatgt
gttgccatttataaactcagtgttcttccaggaaacttcaaacagaaattggcactttca
gtttctccggaacaagatcacaaatcaattatagagggtcgacttacagtcaagcaatcc
cagctgaagcattggacagcaatatga
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