KEGG   Styela clava (leathery sea squirt): 120341983
Entry
120341983         CDS       T07291                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03008  Ribosome biogenesis in eukaryotes
sclv03013  Nucleocytoplasmic transport
sclv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120341983
   03008 Ribosome biogenesis in eukaryotes
    120341983
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120341983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sclv03019]
    120341983
   03009 Ribosome biogenesis [BR:sclv03009]
    120341983
   03016 Transfer RNA biogenesis [BR:sclv03016]
    120341983
   03036 Chromosome and associated proteins [BR:sclv03036]
    120341983
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sclv04147]
    120341983
   04031 GTP-binding proteins [BR:sclv04031]
    120341983
Messenger RNA biogenesis [BR:sclv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     120341983
Ribosome biogenesis [BR:sclv03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    120341983
  Pre-60S particles
    120341983
Transfer RNA biogenesis [BR:sclv03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    120341983
Chromosome and associated proteins [BR:sclv03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     120341983
   Spindle formation proteins
    120341983
Exosome [BR:sclv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120341983
GTP-binding proteins [BR:sclv04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    120341983
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 G-alpha RsgA_GTPase Gtr1_RagA RNA_helicase ArgoMid GTP_EFTU Pox_A32 AAA_16 AAA_24 TsaE NTPase_1 AAA_7 AAA_33
Other DBs
NCBI-GeneID: 120341983
NCBI-ProteinID: XP_039266540
LinkDB
Position
Unknown
AA seq 217 aa
MAQQQADSDIPRFKLVLVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLSFHTNRGK
IIFDVWDTAGQEKFGGLRDGYYIRGQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIV
MVGNKVDIKDRKVKAKAIVFHRKKNLQYYDVSAKSNYNFEKPFLWLARKLCGDANLEFAE
MPALQPPEVSVDQEMIKKWDAELAQAANAPLPEEEDD
NT seq 654 nt   +upstreamnt  +downstreamnt
atggcacagcaacaagcagacagcgacatcccacgttttaaattggtacttgttggtgat
ggaggtgtaggcaagacaacgtttgtcaagcgtcatcttactggagagtttgaaaagaaa
tatgtggcaaccctcggagtagaagtccatccgttaagttttcacacaaatcgtggaaaa
attatttttgatgtctgggacacagctggacaagaaaaatttggaggcttgagagacgga
tattatattagaggtcaatgtgcgattattatgtttgacgtgacgtcccgtattacgtac
aagaacgtacctaactggcatcgcgatctggttagagtttgtgagaatattcccatcgtg
atggttggaaataaggttgacattaaagatcgcaaagtgaaagcaaaggcaatcgttttc
catcgaaaaaagaatctgcagtactacgatgtttcggccaagtccaattacaattttgaa
aaaccatttctttggttggcacgaaaattatgcggagacgccaacctcgaatttgcggaa
atgcctgctctgcaaccaccggaggtcagcgtagatcaagaaatgataaaaaaatgggac
gcggaacttgctcaggctgccaatgcacctctacccgaggaagaggatgattaa

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