Styela clava (leathery sea squirt): 120342054
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Entry
120342054 CDS
T07291
Name
(RefSeq) beta-1,4-galactosyltransferase 2-like
KO
K07967
beta-1,4-galactosyltransferase 2 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00052
Galactose metabolism
sclv00510
N-Glycan biosynthesis
sclv00513
Various types of N-glycan biosynthesis
sclv00514
Other types of O-glycan biosynthesis
sclv00515
Mannose type O-glycan biosynthesis
sclv00533
Glycosaminoglycan biosynthesis - keratan sulfate
sclv00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sclv01100
Metabolic pathways
Module
sclv_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120342054
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120342054
00513 Various types of N-glycan biosynthesis
120342054
00515 Mannose type O-glycan biosynthesis
120342054
00514 Other types of O-glycan biosynthesis
120342054
00533 Glycosaminoglycan biosynthesis - keratan sulfate
120342054
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
120342054
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sclv01003
]
120342054
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
120342054
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
120342054
2.4.1.90 N-acetyllactosamine synthase
120342054
Glycosyltransferases [BR:
sclv01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
120342054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Glyco_trans_2_3
Motif
Other DBs
NCBI-GeneID:
120342054
NCBI-ProteinID:
XP_039266655
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MTHYNVFYNILIHLRSSSRCYIMLIGSIGLNKKVKLCMTAFVAASLFVYIILALSAGQVS
LESLKTKKTGWVSPWKLHYGIYKPKPGQKIARVADRKRIITRFGLVDIMSLNDNTRLSHD
DLLRASAFFMYDEFEKNSQKQFLTFKNQKEKYPNWTDNDPLQPMGKPLCPIIPPELKGKF
KDKPDDSNQPSLQNISIANPDLTLGGKYTPPCHPRSKIAIIIPLRGRETQLRTLLAHMHP
IWQRQQIDYTVYVVSQEANNRTFNKAKLMNAGFLEASKYDTYDCFVFHDVDLLLEDDRCL
YRCVDSDNARILAARMDKFNYTEQAYMMPCKPKEYPDESPAIYFGGVAMMTSRQFYRTNG
YSNLFWGWGSEDMDMYFRLWHRGHEVVQPYGEMCSYHMIKHEHEKLNKENDGRFGLLKNS
IDRMKYDGLTSIRYKILSVERNRLFTNITLSIGYPNKPLLEFMNQEYDSFEDKCEAKAPW
QLT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacacactataacgttttttataatattttaatacatttaagaagcagtagccgatgt
tatataatgctgatcggtagtataggcttaaataagaaagttaaattatgtatgacggcg
ttcgtggcggcgtctttatttgtgtatataattctggctctcagtgctggccaggtatca
cttgaaagcttgaaaacgaaaaaaacgggttgggtgagtccgtggaaactacattatggc
atatacaaaccaaagcccggacaaaaaatagccagagtagctgatagaaaacggattata
actagatttggcttggtggatataatgtcgttaaacgacaacactcgtcttagtcacgac
gacctattaagggcttcagcatttttcatgtatgacgaatttgaaaagaactcgcagaaa
caatttttaactttcaaaaaccagaaggaaaaatacccgaattggacggataatgatcca
ctccaaccaatgggcaaaccattatgtcccattattcctccagagttgaaaggaaaattt
aaagataaacctgacgactctaatcagccttcgttgcaaaatatatcaatagcaaaccct
gatttgactttagggggtaaatataccccaccttgtcacccaagaagcaaaatagcgatt
attataccattacgaggccgagagacccaattacgaactttgctggcgcatatgcaccca
atttggcaacgacagcagattgactacactgtttatgtggtttctcaagaagcgaacaac
cgaacgttcaataaagcaaagctgatgaacgcagggttcctcgaagcaagtaaatacgat
acctatgattgcttcgtgttccacgacgtggatttactgcttgaagacgatcgctgttta
tacagatgcgtggattccgataatgcaagaattttagcggcacgaatggataagttcaat
tacacagaacaagcatatatgatgccttgcaagccaaaggaatatcctgacgaatcgcca
gcgatatatttcggaggagttgcaatgatgacctcgaggcaattttatagaaccaacgga
tactccaatcttttctggggttggggatccgaggacatggacatgtattttagattgtgg
caccgaggacatgaggtcgtacaaccttatggcgaaatgtgctcgtatcatatgataaag
catgagcacgaaaagttaaataaagagaacgatggcagatttggattgctaaaaaactcg
attgacagaatgaaatatgatggactaacatcgatcagatacaaaattctttccgtggaa
cgaaatcgcctgtttacaaacatcactcttagtattggataccccaataaaccgttgctc
gaattcatgaaccaagaatatgattctttcgaggacaaatgcgaagcaaaagctccttgg
caactcacatga
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