Styela clava (leathery sea squirt): 120342216
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Entry
120342216 CDS
T07291
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00514
Other types of O-glycan biosynthesis
sclv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120342216
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120342216
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sclv01003
]
120342216
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120342216
Glycosyltransferases [BR:
sclv01003
]
Glycan extension
O-Glycan
120342216
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
120342216
NCBI-ProteinID:
XP_039266893
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MLSIPKQNVRSKISVLGVVQMISALTILNLLFTILSFFNVPDVEENYDMDQPMEFGRYRD
EKLSIDAIPGAPLIILKPEEVFTRLSRKNHHDNHKFETIKNGIFMSVRTTNKYHKSRLKI
LLDTWISEVPENTWIITDEEDGWLVQYIRDHFKNAKPHILNTHCPTTSEHKWALLCKLHW
EYRTFLSSNKLWFCHFDDDSFVNIGMLTNLLSSHSEDDVMYIGRTPSKTPITAMAYDTEN
VEPESFGFNETTNETTWVMSQSTFQRVAFHYALGGAGFCISRQLAVDMKEYALGSRLMHM
AASINLPDDCVFGYIITHQLNVSLITTNLVHTHMENLTLIPKSSLQQQVTLSYSLPEETR
HSEMENISDTKKNVVENAENSVFFHRNFSDSNVIKPNLTKPNVVNLNKYFSAKYDPTRFY
NLHQLVYIRGGQHVDRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgctatctatacccaaacaaaatgttagatcgaaaatatctgtgcttggtgtagtacag
atgatttccgctttaaccatactaaatctgctctttacgatcttgtcgtttttcaatgta
ccggatgtggaagaaaactatgatatggaccaacctatggaatttggaagatatcgtgac
gagaaacttagtatcgatgctatcccaggtgcaccattgattattttgaaaccagaagaa
gttttcacaagattaagtcgtaaaaatcatcatgataatcacaagttcgaaacaataaaa
aacggaatatttatgagcgttcgaacaacaaataaatatcacaaaagcagattaaaaatc
ctattggatacatggatttcagaagttccagaaaatacatggattattacagacgaagaa
gatggatggttggtgcaatatatcagagatcacttcaaaaatgcaaaacctcatatatta
aatactcattgcccgacaacttcagaacacaaatgggcacttttgtgtaagttacactgg
gaatatcggacttttctgtcttcaaacaagttatggttttgtcactttgatgatgatagt
tttgttaacattggaatgcttacaaacttgttgagttctcattcagaagatgatgtcatg
tatattggacgaactccatcaaaaactccaattacggcaatggcatacgacacggaaaat
gtggagccagaaagcttcggttttaacgaaacgacaaatgagacaacgtgggttatgtca
caatcaacatttcagcgagtagcatttcattatgcattgggcggtgcaggtttttgcata
tctcgccaacttgctgtagacatgaaagaatatgctctcggatcacggctcatgcacatg
gctgcatccattaatttacccgacgactgtgtattcggctacattataacacaccaactt
aatgtgtctcttataactacgaatctcgtgcacactcatatggagaatttgactttgatt
ccgaaatcttcattacagcaacaagtgacgttaagctactcgctaccagaagaaaccagg
cactccgagatggaaaatataagcgatacgaagaaaaatgtagttgaaaacgctgaaaac
tctgtattttttcatcgaaatttttcagatagcaatgtcatcaagccgaatctgactaaa
ccaaacgtggtcaatttaaacaaatatttttccgcaaaatatgatccaactagattttat
aacttgcaccaattagtttacatcaggggtggccaacacgtcgatcgcgtctga
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