Styela clava (leathery sea squirt): 120342224
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Entry
120342224 CDS
T07291
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03082
ATP-dependent chromatin remodeling
sclv04145
Phagosome
sclv04814
Motor proteins
sclv04820
Cytoskeleton in muscle cells
sclv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120342224
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120342224
09142 Cell motility
04814 Motor proteins
120342224
04820 Cytoskeleton in muscle cells
120342224
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120342224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120342224
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120342224
03036 Chromosome and associated proteins [BR:
sclv03036
]
120342224
03029 Mitochondrial biogenesis [BR:
sclv03029
]
120342224
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sclv04812
]
120342224
04147 Exosome [BR:
sclv04147
]
120342224
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120342224
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
120342224
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
120342224
NuA4 complex
120342224
Chromatin remodeling factors
BAF complex
120342224
PBAF complex
120342224
GBAF(ncBAF) complex
120342224
SWR1 complex
120342224
Mitochondrial biogenesis [BR:
sclv03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
120342224
Cytoskeleton proteins [BR:
sclv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120342224
Exosome [BR:
sclv04147
]
Exosomal proteins
Proteins found in most exosomes
120342224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
120342224
NCBI-ProteinID:
XP_039266903
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQSAATSSSLEKSY
ELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMFPGIADRMQKEVSALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagttgctgcactagtggttgataatggttccggtatgtgtaaagctggg
tttgctggagatgacgccccaagagcagtcttcccttccatagtcggacggccacgtcat
cagggtgttatggttggaatgggacaaaaagacagttacgttggcgatgaagcgcaaagc
aaaagaggaatccttacactcaaatatccaatcgaacacggaattgtcaccaactgggat
gacatggaaaagatctggcatcatactttctacaacgaacttcgcgtggcacctgaagaa
cacccagtccttcttaccgaagctccattgaatcccaaagccaaccgtgaaaagatgacc
caaattatgttcgaaaccttcaacgcacccgcaatgtatgtagccattcaagccgtctta
tcactttatgcatctggaagaacaactggtattgtcatggactctggtgatggtgtatcg
cacactgtgccaatctatgaagggtatgctttgccacatgcaatcctccgcttggatctc
gcagggagggatttaacagattatctgatgaagatattaaccgagcgaggatattcgttt
acaacgacagccgagcgcgagattgtacgcgatataaaggaaaagctctgctatgtcgca
ctagatttcgaacaagaaatgcagtctgcagccaccagtagttcgttggaaaagagttac
gaacttccggacgggcaagttattacgattggtaatgaaaggttcagatgtccagaggca
atgtttcagccatcttttctgggaatggaatctgctggaattcacgagaccacatacaac
tccatcatgaaatgcgacgttgatatccgtaaagacttgtatgcaaacaccgttttgtct
ggcggcactacgatgtttccaggaatcgcggatcgtatgcagaaagaggtttcagctctt
gctccttccacaatgaagatcaagatcattgctccacctgagagaaaatactcagtatgg
attggtggatctatccttgcttcgctctctacattccaacagatgtggatttctaaacag
gaatatgatgaatctggtccttcgatcgtgcacagaaaatgtttctaa
DBGET
integrated database retrieval system
