Styela clava (leathery sea squirt): 120343895
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Entry
120343895 CDS
T07291
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K08558
nuclear receptor subfamily 4 group A member 2
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120343895
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sclv03310
]
120343895
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
120343895
Nuclear receptors [BR:
sclv03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
120343895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120343895
NCBI-ProteinID:
XP_039268852
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MQIENNGNSSILGSLPFLIDNGLYSDFFNPTAARATVQTYCNSNIEDSFEFKEGFQADYT
GTAFTLDNTVCSSPEISPSHSASTVEDVFCNYNGSIIQDFYESDHSGYCGDSVTSTDLSP
ESLKTQKASSCNKSQQVLIVGVPEVDAVTHKINEQDAEHSMKESDIVTTSSLVIHPENIM
STTALSAYATQHNMADHIAMYPHAQALSPDINSVNKIVSRSQYHASMSGEGNCRDISDYN
SQSRTSPSGYQSATSPMLPPPAYHRDSPANRRLSTGSSSVPPRGEYNGMEDLAQYNSGPY
SAPGELLRPKCEPHSTSYLQEENLSPVMNSIPSPVNQVNQQVRATYTSRQSPIFNEAAEF
SNSMYFPAERGDAKAIKSTNSYDVITANSYRHMKHHDSSPTQSSIAQKESGDSRMREIMK
KSAYDFSSYPCSSRQGADEDEFHQDLGRNEMNSLSPRINYVGTKGEIPSASFGSANDVSG
YSETEIAGSSMKNHSPSSSPVSNARAILMTYQEHGSRPTENIPSLEPRTLQSTIPEQIHQ
QTSSLYSMYAGDRTYIQGEYANVHPSEMGQSDMCSPTSSTKTDFITMMNRNQNTIPSSNY
QSAEFEKHCNLFGSVALGRSVENVFQRRPAESMTTGPRFVDQQSFSALDKGNTFKSLLVG
SNVFRPTLSLDVDRIAESISNSHSNYANDMRLKMGPSVNAIRSQYQLHHQMDVGNSVISQ
HSIRHSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNSKYVCLANKNCPVDKRRR
NRCQYCRYQKCLAVGMVKEVVRTDHLKGRRGRLPSKPKGPQDPVAPPSPPVSFITSLVRA
HVDTNPAISNTDFSRYRPATMSSYSPILSDADETKNFYNLLGSCAMVEKDFAEKIPGFTD
LDKDDQAILTDSAFAEIFVLRMAYRSDYQEGKLIFSNGVALHRDQLYRSFGEWIDLIMDF
TCSLNDLNVDISSFSCLLALILFTDRRGLKDPRKVEELQNKTIASLKNHVTHSSVASDRP
NYFSKLLDKLPDLRLVADHGRQRIFLHKMQNLVPFPQYLDSIFQDTTSAP
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcgaaaacaacggcaactcttcaatcctgggaagtttgccatttttaatagac
aacggattgtattctgactttttcaatcctaccgctgcacgtgctacagttcaaacgtat
tgtaacagcaatatcgaagactcattcgaattcaaagaaggctttcaagcggattatacc
ggaacagcatttacactagacaacactgtttgtagctctccggagatttcacccagtcat
agtgcgtcaactgtggaagacgtgttttgtaattacaacggaagtataattcaagacttt
tacgaatccgaccattcaggatactgtggtgattctgtaacatcaaccgacctttcccca
gagtcgttgaaaacacaaaaagcaagctcctgcaataaatctcaacaagttttgattgtt
ggagtaccagaagttgacgctgtcacacataaaataaacgagcaagacgcggaacattca
atgaaagaatctgatattgtcacaacatctagcctcgttattcatcccgaaaacataatg
agtacaactgctttatctgcatacgccactcagcataacatggcggatcacatagcaatg
tatcctcatgctcaggcattgtccccagatatcaattcggtaaataaaatagtcagcaga
agtcaatatcatgcaagtatgagcggcgagggaaattgtcgagacatatccgattacaac
tcacaatctcgaacgtcaccttccggatatcagtctgcaacgtctccaatgttacctccg
ccggcttatcatcgtgattcgcctgctaacagaagactttctaccggatcttcttcagtt
ccgcctagaggagaatacaatggaatggaggatttagcacaatataattcagggccttac
tcagctccaggggaattgctgagaccgaagtgcgaacctcatagcacttcatacttacag
gaagaaaatttgtcacccgttatgaacagcattccctctccagtaaatcaggttaaccaa
caagtccgagctacgtacacaagcaggcagtcacctatattcaatgaagctgcggaattc
tcaaacagtatgtacttccccgccgagagaggcgatgcaaaagctattaaaagcacaaat
tcttatgatgtcataactgcaaactcatatcggcatatgaaacatcacgactcatctcct
acgcaatcatctattgctcagaaagaatccggagattcgagaatgcgcgaaataatgaag
aaatcagcatatgatttttcctcatatccctgtagttcgcgtcaaggggcagacgaggat
gaatttcatcaagatttgggtagaaatgagatgaattcgctttctccgcggataaattat
gtcgggactaagggggaaatcccgtctgcgtcatttggtagtgcaaatgatgtatctgga
tactctgaaactgaaattgctggctcgtctatgaagaatcacagcccttctagttccccg
gtaagcaacgctcgagcaattttaatgacctaccaagaacatgggtctcgtccaacagaa
aacattccttcattggaaccgagaaccctgcagtcgacaatacctgaacagatacatcag
caaacgtcatcgttatattctatgtatgctggtgatagaacatacattcaaggcgaatac
gcaaatgttcatccaagtgaaatgggccaatcggatatgtgctctcccacctctagcact
aagacggattttataactatgatgaaccgaaaccaaaatactattccgtcttctaattac
caatcggcagaatttgagaaacactgcaatttgtttggatccgttgctttgggacgttca
gtagaaaacgtatttcaacgacgcccagccgaatcaatgacaacgggaccaaggtttgtc
gaccaacaatctttttctgcgttggacaaaggaaatacctttaaatcgttattggtcgga
tcaaacgtattccgtcctactttgtcgctggacgtcgacaggatagcagaatctatttca
aactcacattccaactacgcaaatgatatgcgattgaagatgggaccttcggtgaatgct
atacgtagtcagtatcaactccatcatcaaatggacgtaggaaattcagtcatatctcaa
cattctattcgacactccaatgaaggtttatgcgcagtatgcggcgataacgcagcttgt
cagcattacggagttcgtacttgcgagggttgcaaaggattttttaagagaactgtccag
aaaaattcgaaatatgtctgtcttgcaaataagaactgcccagtcgataaaaggagacga
aatcggtgccagtattgccgctatcagaaatgtcttgcagttgggatggtcaaggaagtg
gtcagaactgatcacctaaaaggaagaagagggcgattaccatcaaaaccgaaaggtcct
caagatcccgtagcacctccctcgccacctgtcagttttatcacgtcactggtacgagct
cacgtcgataccaaccctgcaatatcgaacaccgatttctcgagatatcgtcctgctacc
atgtcctcgtattcaccaattttgagtgacgctgacgaaacaaaaaacttctacaacttg
cttggaagttgtgccatggtggaaaaagattttgccgaaaagattcctggtttcacggat
ctggataaagacgaccaggctatcctcaccgactctgcatttgctgagatattcgtttta
cgcatggcttacagatctgactaccaagaagggaagcttattttttctaatggcgtagct
ttgcatcgtgatcagctgtaccgctcatttggcgaatggatcgatttgattatggatttt
acctgttcccttaacgacttgaacgttgatatttcgtcattttcttgtctgcttgctctc
atacttttcacagatcgacgtggattgaaagatccaaggaaagtcgaagaattacaaaac
aagactatcgcttcgctgaaaaatcacgttacacatagttcagttgcgtcagataggccc
aactacttctctaagcttcttgataagcttccagatttacgtcttgttgctgatcacgga
cggcaaagaatatttctacataaaatgcagaatcttgttccgtttccacaatatcttgat
agcatttttcaagatacaacgtccgcaccgtga
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integrated database retrieval system
