Styela clava (leathery sea squirt): 120344217
Help
Entry
120344217 CDS
T07291
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00514
Other types of O-glycan biosynthesis
sclv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120344217
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120344217
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sclv01003
]
120344217
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120344217
Glycosyltransferases [BR:
sclv01003
]
Glycan extension
O-Glycan
120344217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
120344217
NCBI-ProteinID:
XP_039269272
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MDNRFRFRVAWTFVALICVTTWVCLTAVLYISHEKFRLQNYYFYEREFSKNEADVGIKYR
HIPPKKENILPKDEDLFESRSLSGFPSISYSDYPDDIIALHDVFISVKTSEKFHSTRLDL
ILRTWWNTAKEQIYIFTDVDDNQLKNRTDGHIINTKCRRTHHRQDLSCKIGQEYDAFIES
GKKWWCHFDDDNYVNVDALLRSLRNYNWKSDVYLGKPSINHVVEAIYKGNKVHFWFATGG
AGVCISRSLGEKMNSWSRHGKFQATSERLKLPDDCTLGFIINNRLGVELTKVDEFHSHLE
QLSLIQQDKLSQQVSLSYFIDEDKGSNVIELDKKISAYSIEDDPTRFLSLHCLINPKVDW
CSKKKAMQRNQVNV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggacaaccgatttcgttttagagtagcttggacatttgtggctttaatttgtgtcaca
acgtgggtatgcttgacagcagttttgtacatctcgcatgaaaaatttcgtttacaaaat
tattatttctacgaaagagaatttagtaaaaatgaggcagatgttggaattaaatatcgc
cacattccgcccaaaaaagaaaacattttgcccaaggacgaagatttgtttgaatctcga
agtctctctggatttcctagtatcagttattcagattatccagatgacatcatagctctt
catgacgtatttattagcgttaaaacaagtgagaaatttcactccacgcgattggatctt
attcttcgtacttggtggaacacagcaaaagaacaaatatacatatttactgatgtggat
gacaatcaactgaaaaacagaacagacggtcatatcatcaatactaaatgtaggagaact
catcacaggcaagatctcagctgtaagataggacaagaatacgatgcatttattgaaagc
gggaaaaagtggtggtgccattttgacgacgacaattacgtcaacgtggatgcgctgcta
cgttccttacgtaattacaactggaaatcagacgtttacctcggaaaaccgagtattaat
cacgtggtagaggcaatatataaagggaataaagtgcatttctggtttgcaactggagga
gctggagtttgtatttcaaggagtctcggggaaaagatgaattcatggagcaggcacggc
aaatttcaagcaacttccgagcgtttgaagttgccagacgattgcacactcggcttcata
ataaacaatcgtctcggggttgaactaacaaaggttgatgaatttcactctcatctggaa
caactgtcactaattcagcaagataaactatctcagcaggtttccctcagctatttcatt
gacgaggataaaggttcaaatgttatcgagcttgataaaaagatctccgcatattctata
gaagacgatccaactcgtttcttgtccctacactgcctaataaatcctaaagttgattgg
tgttcaaaaaagaaagcaatgcaacgaaaccaagtcaacgtttga
DBGET
integrated database retrieval system
