Styela clava (leathery sea squirt): 120345370
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Entry
120345370 CDS
T07291
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120345370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120345370
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120345370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_2nd
Ig_NUP210_1st
Ig_NUP210_5th
Ig_NUP210_3rd
Ig_NUP210_4th
Ig_NUP210_7th
Ig_NUP210_13th
Ig_NUP210_15th
Ig_NUP210_6th
NUP210_Ig
Ig_NUP210_9th
Ig_NUP210_8th
Ig_NUP210_16th
Big_2
Ig_NUP210_14th
Motif
Other DBs
NCBI-GeneID:
120345370
NCBI-ProteinID:
XP_039270727
LinkDB
All DBs
Position
Unknown
AA seq
1945 aa
AA seq
DB search
MLPIYIRICSIFLLHFCEGAIEPKILLPFHGDYQVNYTIHAEDGCYQWKSLRQEVATIRP
IESAFDPVNMCSSSAIVIVMSTQPVRKTTLVLATNVKTGTIFSCDIIVDRIETIDIVSRT
RELYLADPPEELKIRALDQEGNTFSSTAGMEFEWSLAQDEKYHKGSDGEMHHPPVSSHSI
LHIQKFLDTIYVADPYVDSLEVKGKMSDTILISGIQTGAAVVVAKLVSTIECHKAISTCS
VRFIVRDKVLLNPSHDIYLLKHAVVEYKVERWREGIPSQITMPCPQYVLDVRDITGTPGS
VIHLNKETSVVVGLNGGHSQLYLVDQHLKHYDDSLMEQATSDIYVVEAAYLRFEISPYQK
WILEVGRIYEITVHIYSEDNKEIWPANNVRLVGELDNKYLNVLETVKNGTWFLVKALTKG
NCDIKSLLKGVVNVGSMIMQAGIFSKGSENMEIFDSPISTFQNLEIFDKIVVTPPAVLFP
WQPDPLLYQYTFQASGGSGNYTWSVNETESSSISYTGKVSVSSGSDEKHHPRKIAVKAAD
IRNSFHFGTATVTIAPPAKLKFAISYLEAEVGDELNLYISMYAKINNEYVAFTDCSIMKS
LVWTIHDTNIFKFAKNTEQVPDEFLDPVPQTPPCLMRKVKSLKSGHTTVSLSYHNKLLEE
TLESSTVIAAYEPLRILDPSQIAVVSLASSKMMRFEGGPDPWPLLPNNHEKIIRGDNANF
NFHQQLSGKEYIFIGTCMVLGETTVALNIQNRPCGTNPFPRKAQITLKLSCATPASVKLA
VQNLPPSCPLFQNQNEHSVALAGDILHLTVTAFDKFGYQFDNFTSLSKRWISSSFSMVSA
STTKSQFVPNSDGQTKHFIRQGLLMPRDVGEKALQLHIDRYEDFVKRDICSKYDCKVSPS
VQASVALDIVNVITLSPQSIVMFNRPNFSSSIEIIGGSGYFDHEIKTESNFGIAKDVVLT
VHKLPSDRKVILNPVSAGHASLEIFDICIPKATKTEGAKSRAGIVVSDLSSLFLEVSSPL
EVGTTGKATIRLDMRELSAPNELDLSINLMSEPPGIISLGEPNRHDDLIFLADLTALKVG
TTTIRASTTSRDGKLISSNSVRIVVFPPLELKPSRITVIRGSEFHLYVEGGPPEDVQIHY
VVEDEGIASSSHDGVLSAHQIGNTTVSVKATTKDGQVFHGKSKSFVFVVQIKGVWIDSPT
FRFQTGATVPLHVYGYAGPGYDPVNLDSDAAGLVFKWKVNNHAVLDLKSAHAEAGIEIPD
RLKFTVLINGIGEGQSGISVSVSATRINLGQLANAQLDAEIKVVVFNPLIISQEKLWLSQ
NNLLLTPETSYYLLSNRDGLVSRMNYMKLCEECNLNISGNNDDDCVTVNNELRSITTGKS
PCQATIVVSAEERFGITQTLAIHVKVKLVSYIIAQVKEKFYTKNSDDRLTGFPVGSLLSL
EVQQFDSNGMKFDTTVLCDKFGTNRNDLLEITPSPATNILKVKCSKTGVTIFKIWTGSEY
AYSFPLNAVSTINNEGSNMLMEIGSKKCFNSAIVDEDGNPGKWEIKHNGFKVDNVSGAVM
SFSRATADLKYFLDPVSTKVALSSKPFSANFDENVLPEIITNAKSKYILPIKLGDTSDIC
DGLEEEMNKFAQNTFVCKSFLVNTIDAVTVFKPSTLYIPEIGSYACVLDRIDLATSLEEK
VSLFEDASFTITLSINSDEADRGISFQNPVSVRFLPAFKLLNSSQVVMRDEKLRLCISAI
QTIRESLEINTESRNLEIHEVPDTEIHGVACYEVSYIPQQQFNQDHVLKIFSPLTHQEQL
VSIAIHWLPKLPSQTTSVSSGVCVDPDSARESWLMYQYSFSYLGLLIALLVIFITTVAIF
LTCGFFKWAFSPPMTTQDNSSPVMVSPQRLSTGMVPYSPSGSYLFPRSSPVQRGSPSSHS
NSPSPGRTPLWSSSYRLQDASLHQR
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaatatatatccgaatatgttccatctttctattacatttctgtgaaggtgct
atagagccaaaaattcttctcccatttcatggtgattaccaggtcaattatacaatacat
gctgaagatggttgctatcaatggaaatctctgcgacaagaagttgccaccatcagacct
atcgaaagtgcttttgatccagtcaatatgtgctcttcatctgctattgtaattgtcatg
agtacgcagccagttcgaaagactactctagttcttgccaccaatgtaaaaactggaact
atattttcatgtgatattatcgtagatagaatcgaaactatagatattgtgtccagaact
cgtgaactttatttggccgacccaccagaagaattgaagattagagctttggatcaagaa
ggaaatacctttagcagtacagctggtatggaatttgagtggagtctagcacaagatgaa
aaataccacaaaggatctgatggtgaaatgcatcacccgcctgtgtcatcccacagtatc
cttcacattcagaaattccttgatacaatatatgttgcagatccatatgtggactcgctt
gaagttaaaggtaaaatgtcagatacaattttgatatctggtattcaaacaggggcagct
gttgttgtggctaagttggtgagcacaatagaatgtcacaaagcgatttcaacgtgtagt
gtcaggttcattgtcagggataaagttcttttgaatccttctcatgatatatacttgtta
aaacatgctgttgtggaatacaaagttgagcgatggagagaaggaataccttcccagatt
actatgccttgtccacaatatgtgttggatgttcgtgacatcactggaacccctggatct
gtgatccacctcaacaaggagacctctgttgtggtgggtttgaatgggggacacagtcag
ttgtatttggttgaccaacacctgaaacactatgacgattcacttatggaacaggcaacc
tcggatatatatgttgtagaagctgcatatttaagatttgaaatctcgccatatcagaaa
tggattttggaagttggtagaatatatgaaataacagttcatatttatagtgaagataat
aaggaaatatggccagctaataatgttcgtttagttggtgaactggataataaatatctc
aacgtacttgaaacagtaaaaaatggaacttggtttcttgtgaaagctctaacaaaagga
aattgtgacataaagtcacttttgaaaggtgttgtcaacgttggatctatgattatgcaa
gctggtatttttagtaaaggtagtgagaacatggagatttttgattctccgatttccact
tttcaaaatttggaaatttttgataaaattgttgtaactcctcctgctgtactcttccca
tggcagccagatcctcttttgtatcaatatacatttcaagcatctggtgggagcggaaat
tatacctggtctgtaaatgaaactgaatcatctagtatttcatacacaggtaaagttagt
gtttctagtggatctgatgaaaagcatcatccaagaaaaatagcagtaaaagcagctgat
atacgcaattcctttcattttggtacagctactgtcactatagcccctcctgcaaaactg
aaatttgccatatcttaccttgaggctgaagttggagatgagttgaatctgtatatctca
atgtatgctaagattaacaatgaatatgtagcctttactgattgctctatcatgaaaagt
cttgtgtggactatacatgataccaacatttttaaatttgcaaagaatactgagcaagtg
ccagatgaatttttagatccagttccacagacaccaccatgcttgatgcgcaaagtaaag
tctttgaagagtggacataccactgtatcactgtcctatcacaataaacttctagaggaa
actctggaatcttctacagttattgctgcatatgaaccacttagaatactagatccttca
cagatagctgttgtatcattagcttcttccaaaatgatgcgttttgaaggtggaccagac
ccatggccattgcttccgaacaatcatgagaaaattataaggggagacaatgcaaatttc
aactttcatcaacaactttcaggcaaagaatacattttcattggaacttgcatggttttg
ggtgaaacaactgtagctttaaatattcagaataggccatgtggaacaaatccttttcca
agaaaagctcaaatcacattgaagctttcttgtgccactcctgcttcagtaaaacttgct
gtacaaaatcttcctccatcctgcccgttatttcaaaatcaaaatgaacattctgttgct
cttgctggtgatattttgcatctcacagtgaccgcttttgataaatttggttatcaattt
gataattttacctcattatccaagcgttggatatcgtcttcattttcaatggtttctgcg
agtactacaaagtcgcaatttgtgcctaattctgatggacaaacgaagcacttcatacgc
caaggcctgttgatgcctagagatgtgggagaaaaggcattgcaattacacattgacagg
tatgaagattttgtaaaaagagacatatgctccaagtatgactgcaaagtcagtccatct
gttcaagcatctgtggcattagatatagtaaatgttataacattatccccacagtctatt
gtgatgtttaatagaccaaatttcagttcgtcaattgagattattggaggatcgggatat
tttgatcacgaaattaaaactgaatcaaattttggaatagccaaggatgttgttttaaca
gttcataaacttccctcagaccgcaaagttatactcaatccagtttccgcagggcatgca
tctttggaaatttttgatatttgcattccaaaggcaacgaaaacggaaggagcgaaatct
agagctggtatagtggtatcggatttgtcatctcttttcctcgaggtctctagccctctt
gaggtgggaacaactgggaaagcaacaattcgccttgatatgagagaactttccgctcca
aatgaattggatttgagcataaatttgatgtctgaaccacctggtatcatttcacttgga
gaaccaaacaggcatgatgacttgatatttcttgctgatttgactgcactcaaagtaggc
acaactacgataagggcctcaacaacatccagagacggtaaattaatatccagtaactct
gttagaattgttgtatttccaccactggaattaaaaccatcaagaatcactgtgattaga
ggttctgaatttcatctatatgtggagggtggtccaccagaagatgtacaaattcattat
gttgtagaagatgaaggtatagcaagttcttcacatgatggcgttttgtcagcccatcag
ataggtaatacaacagtaagtgtgaaagccacgacaaaagatggtcaagtttttcatgga
aaatcaaagtcttttgtttttgttgttcaaataaaaggtgtatggattgatagtccaact
ttccgctttcaaactggagcaacagtacctctccatgtttatggttatgctggacctgga
tatgacccagtaaatttagatagtgatgcggcaggacttgtctttaaatggaaagtaaat
aatcatgctgtcttggatttaaaatctgctcatgctgaagccggcatagaaattcctgat
agactcaaatttacagtgctgataaatgggataggagaaggccagagtggaatatctgtt
tcagtatcagcaactcgaataaaccttggacaattggcaaatgcacagttggacgctgag
attaaagtagtggtgttcaatccactgataatatcacaggaaaaattgtggctttcccaa
aataatcttttactaacaccagaaacttcatattatcttttgtcgaatcgagatggacta
gtttctagaatgaattacatgaaactatgtgaggaatgcaatctcaatatcagcggtaat
aacgatgatgattgtgtaactgtgaataatgaactaaggagcatcactacaggaaaaagt
ccttgccaagcaaccattgttgtttcggcagaagagcgcttcggcattacacagactttg
gcaattcatgttaaggtaaaattagtctcttatattattgcacaggtaaaagaaaaattc
tacaccaaaaactctgatgatcgtcttactggttttcctgtagggtcattattatcttta
gaagttcagcaatttgatagtaatggaatgaagtttgatactacagttctatgtgataaa
tttggtacaaataggaatgatcttcttgaaataacacctagcccagcaacaaacatcctc
aaggtaaaatgttcaaaaacaggagttacaattttcaaaatatggactggaagtgaatat
gcatatagtttccctttgaatgctgtgtcaactataaataatgaaggtagcaacatgttg
atggaaattggttcgaagaagtgcttcaacagtgcaattgtcgatgaagatggtaatccg
ggaaagtgggaaataaaacacaatggcttcaaggtggataatgtttctggagccgttatg
tcattttctcgagccactgctgatcttaaatatttcctggacccagtttcaacaaaggtt
gctttgtcttcaaaacctttttctgccaactttgatgaaaatgtgcttcctgaaatcatt
actaatgctaagtctaaatatattctgccgattaagttaggggatacaagtgatatttgt
gatggtttagaagaagaaatgaacaaatttgcacaaaatacatttgtatgtaaaagtttt
ctagtcaatactatagatgctgtcactgtattcaaaccgtcaacattatacatcccagaa
attggttcctatgcatgtgtgcttgatagaatagatcttgccaccagtttagaagagaag
gtatcattatttgaagatgccagtttcacaatcacattatccatcaatagtgatgaggca
gatcgtggaatttcatttcaaaacccggtcagcgtcagattcttaccagcattcaaactt
ctgaactcatcacaagttgtcatgagagatgaaaaactaagactgtgcatatctgcaata
caaacgattcgcgaaagcttggaaatcaatacagaatctcgaaatcttgagatacatgaa
gttccagacacagaaatccatggggttgcttgttacgaagtatcatatattccacaacaa
cagttcaatcaagatcatgttttaaagatcttctcaccacttacccatcaagaacaacta
gtgtcaattgcaattcattggctgcctaaactcccatcacaaacaacttctgttagcagt
ggagtgtgcgttgaccctgattcagccagggagtcatggcttatgtaccaatattccttt
agttacttaggattgcttatagcattgttagtaatatttatcacaactgtagcaattttt
ctcacttgtggatttttcaaatgggcattctcgcctccaatgacaacacaagacaattct
tcacctgttatggtgagcccacagagactatccacaggtatggtaccttattcaccaagt
gggtcatatttatttccacgctccagtccagtgcaacgtggttcaccatcctctcattcc
aattccccttctccagggaggactccgttgtggagttccagttatcgattacaagatgct
tcgttacatcagcgatga
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integrated database retrieval system
