Styela clava (leathery sea squirt): 120345512
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Entry
120345512 CDS
T07291
Name
(RefSeq) integrator complex subunit 1-like
KO
K13138
integrator complex subunit 1
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120345512
Spliceosome [BR:
sclv03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
120345512
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
TIC20
Motif
Other DBs
NCBI-GeneID:
120345512
NCBI-ProteinID:
XP_039270920
LinkDB
All DBs
Position
Unknown
AA seq
2237 aa
AA seq
DB search
MKRTTSGPPKRLRPGPPADLIALGKSKTELQRAAPEPSLPSIKKVSTFHTIAAATSSHQS
RMSPTIPEPSVKYIDAAAQDLLKKVTEAKDQETVDGLVCGAIRVLRANRLRPDQVIVYTL
MVLAKKQPSIFTSEMVVECLVGLLKKDVGLEYIKSKGNSISAVLACNLLFTGFEQNYSWP
SLLVKVFIEDSLSDRIWVDHPKCKKFVSSVSTAFDTVQISKEHKVDTGEDVDMKEKDESS
EDEQNVSKRFMASAELVRLYAIDMVRERVNRRQGTISAQDPTGAASGRHLIKTLIAMCGI
SEIRVIAAHKLEMWSQNPKLAKSTQDLLMSICVNCRDHNQDDVDVISCLVKMRLKTKALL
NHYIQCLKILIDAHKDSINTLFSYIIYNELSSARNPTNMSVIAALLQHKPKIAAETLAIV
CQDLLLQKEDYLRAVRALVREIVRIAKHDVQFTSFALGIMKEPDREKFMHLDQAHKERFV
SSTADLVCLLMLVSISPTVKEAIGVITKKATPTSEVDHDTIFHGHKLDLAAMQRDAVWWL
HATAVPLLLPKITTPDLGQHIHKLLFLKSAETYYMKDNWPPESERAMMVKHCAEVPLLED
TIMRLAVIGLSHEHPIAPAETLELIGQLVHRAGALAKPHFNPIPVERRDVIDTLLSLAQY
HHPENIHLPSDYVPPSLAISLLYWSIWQTLLIISSFNPSSIGLQAWNEYPILRSFMEMAI
INNFTFPLATVVEENERSQIVNKEMQMVEMEKNEIIEFESHLAAATTHLAVTEETSLLLS
QLIAMDTKGPPRRPPEHILNKTRLICSQIQVGAGLCRSRNPDFLLYIINRHGEDQAMPWL
SSLVGSAKGDMSMLPVQCLCEYLMASSVDDSKAENKLIQEKEIVAQLQNSLRNQQTEESW
QPINYFLRRLHSPQYETRLRAKHALSLVLRDEDMDTNDPKICHVQPVLEDYEWLLYQLVS
LPNYNFVHSKAVDAITETIKWDSDESMVTACLAFLADDITKLDLSLEDSAQSVSRFALST
AHLLIDRQVLVRNILSDTIKKSGSSGKTIANIFVESILKIFLCHMNLIKKQHSSDGTDHE
ETMEQVPWCDTQDEIFLRWPRGSGHAQMHILVSQAMILLLTCGRPKQKRGNADSLEGNKM
YQEVLQTWFAEDGSTIPKAFLMDTQEEALLLPDWLRLRLLHCEVNATDARLPIAGSRDLD
LEQLLLFIQSFGIPYQSMDRLLGSLDEFCSSTPEAVANSVKDNRSYLAKLVEGQWKRGCC
NGTDFHALLSMEKLSPRPSVIQSASATITDVVDLTVDQSEDSDIIMVSSPEKATSSQEED
ENLSMLVDDSVTNMLQDLFMANGNDVIKYKMKKNLIFRNLMRSINLRKMKNSNGVVNCVS
EMYALVSAKKTGLVFLNGLYMNTNWSCSLIRKIDSSLKRAKSCSNLSQRKIIDSSIEVFE
KLVLILKVKAPSSLSSENHLLLLLQSWACSEKKQQAESEGLGQLDWARLEEFLRKQLAFL
ERDEEIKNKVALVAKILLEEIGNRKSKASRGKCDVQDDAFYASIGTTGLLIDWLQLLDPE
LLAHRPKLQRKLLFESQRLVTLSMPIKMSAKMSNIKLPQSLTSHQTYLLSLLAEHSNWET
VYKCLQWLLSDSTYETSTEKSGKSQSSGINVDARTAMDFLWVCMHMSNIWKGRENKSTSL
QEPVFYLNSEQFCRVLSYMVASSTKQASSTLKSGWGGTSYFELFLVFYTRFGQKVMRSEN
LEKTVMFVYSKAKENAVDLWWQLLAQLYILQPFHDVWNTTNSQCNEGIEQNYTLAKAVTS
SEVGSICRLDSLVQMLLDRIGYVKETGRVDARDSVTAIQSSVDSAYDASLILKKLASCCP
AIVLRQLSLMLITLSGRTWYEFREFKAKNHLLFMSQLLGILDSIGHQLFDNDYANDVDKI
IDTYLQMCSNYCTKARRQLRDVMHNTLQIVYLFLQKKPQRAHRIVYQYMYMLQGLMDHTY
SDHDYVVSLIRKIMNTVESAPLMMNTYNAETEEPVNDDILIIDTEISDANEQATPYLRIL
AKSDDLENIAQVLAELSDTKRKITNLEPFLPHFTKLFTTCRESSIRHAALSASIVCMRAS
PSRSCPQILPAYLSCLTGIKTPLVSTSSQTRLYELGETTAVTGTNSDELAQTALDFLPDV
VVLCRERAAKILEAAFACGSRGGVGIQPPGPQGLLGTPVAIGGKSTWQDLSELLAKSVTL
LSGLAQSNVKPAPSGQS
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggactaccagcgggcctcctaagagacttcgtccagggccacctgcggattta
attgcacttggaaaaagcaaaactgaacttcagagagcagcccctgaaccaagcctaccg
tcgataaagaaggtatctacattccacaccatagccgcagcaacgtcttctcaccaatct
cgtatgtcacccactattcctgaaccgtctgtcaaatacattgatgctgctgcccaagat
ttactaaagaaagttacagaggccaaagatcaggaaacggttgatggattagtatgtggg
gcaattcgtgttttacgagcaaacagactccggcctgatcaggtaattgtgtatacattg
atggttttggcaaaaaaacagccctctatttttaccagtgaaatggtagttgaatgtcta
gtgggactcctgaaaaaagatgtcggattggaatatattaaatcaaaagggaatagcatt
tctgctgtgctcgcttgcaatcttctctttacaggatttgagcagaactatagctggcct
tccctcttggtaaaagttttcattgaagactcattgagtgatcgaatatgggttgatcat
cccaagtgtaaaaaatttgtatccagtgttagtacagcttttgacaccgttcagatttca
aaagaacataaagttgatactggagaagatgtggatatgaaggaaaaagatgaatcttct
gaagatgaacaaaatgtttctaagcgtttcatggcttcagcagaactagtacgactttat
gcaatagatatggttcgagagagagttaatcgcagacagggcactatttctgcacaggac
ccaacaggtgctgcttcaggtcgtcatttgatcaaaacattaattgcaatgtgtggaata
tcagagatacgtgttatagctgctcataaactggaaatgtggtctcaaaatcctaagcta
gcaaaatctacacaagacctacttatgtcgatatgtgttaactgccgagatcataatcag
gatgatgttgatgttatatcttgcttggttaaaatgcgtctcaaaaccaaggcacttcta
aatcattatattcagtgtttaaaaattttgatagatgctcataaggattcaatcaataca
ttattcagctacattatttataatgaattatccagtgccaggaatcctacaaacatgtct
gttatagctgctcttctacaacataagcccaaaattgctgcagaaactttggcaatagtt
tgccaagatcttctacttcaaaaagaagattatttaagagctgttcgtgcacttgttagg
gaaatagtaagaatagcaaagcatgatgtacagtttacttcatttgcccttggtataatg
aaagagccagatcgtgaaaagttcatgcatttggatcaggctcataaagagagatttgtt
tcttccactgctgatttagtatgtcttctgatgttagtaagtatctctccaacagtaaaa
gaggcaattggggttattacgaaaaaggccacccccacatcagaagttgatcatgatact
atttttcatggccataaattggatttagctgcaatgcaacgagatgctgtttggtggtta
catgccactgcagttccccttcttttacctaaaattacaacaccggatttgggacagcat
attcacaaactgctttttctgaagtccgctgaaacctactacatgaaggataactggcca
cctgaatctgaaagagcaatgatggtgaaacactgtgcggaagttccattactggaagac
acaatcatgcgactggctgtcattggcctttcacacgaacatccaatcgctccggcagag
actcttgagcttattggtcaattagttcacagagctggtgctttggcgaaaccacatttc
aaccctattccagtcgagagaagggatgtcattgacacattgttatctctcgctcaatat
catcatcctgaaaatatccatcttccctctgactacgtgccaccgtctttagcaatttct
ctgctgtattggtcaatttggcaaactctgcttattatttcttcttttaatcccagctct
ataggtcttcaggcgtggaatgaatatccaattcttagaagtttcatggagatggcaatc
ataaacaatttcacatttccactggcaacagtagttgaagaaaatgagagatcacaaatt
gtgaataaagaaatgcaaatggtggagatggagaaaaatgaaattattgagtttgaatca
catttggcagcagccaccacacatcttgctgtaacagaggagacaagtttgttgctttct
caacttattgctatggacacaaaaggcccacctcgtcgaccacctgaacatatactaaac
aagactcgattgatatgtagtcagattcaagttggagccggtttatgccgatctagaaat
ccagatttcttattatacatcattaatagacacggagaagaccaggcaatgccatggttg
tctagtctggttggctctgccaaaggagatatgagtatgcttccagtacaatgcctttgt
gaatatctcatggcgagcagtgttgatgatagcaaagcagaaaacaagctaatacaagag
aaagaaattgtcgctcaacttcaaaattcattacgaaatcaacaaactgaagaatcctgg
caaccaataaactattttttacgcaggctacattccccacaatatgaaacaagactgaga
gcaaagcatgctctatctctcgttctgagggatgaggacatggataccaatgacccaaaa
atatgccatgtacaacctgttctagaagactatgagtggctgctatatcaacttgtgtcc
ctacctaactacaactttgttcattcaaaagcagttgatgcaattactgagacaattaaa
tgggatagtgatgaaagtatggtcacagcttgtttagcttttcttgctgatgacataacc
aaattagatttatcgttagaagattctgctcaatctgtctctcgttttgccttgtctaca
gctcacttgcttattgacaggcaagtactggtgagaaatatattatctgatacaattaag
aaatcaggttcgagtggaaaaactatagcaaatatatttgttgaatctattttgaaaata
tttttatgtcacatgaacttgatcaaaaaacaacattcatcagatgggacagatcacgaa
gagacaatggagcaagtaccttggtgtgacacacaggacgaaatttttttaaggtggcct
agaggaagcggtcacgcccagatgcatattcttgtttcacaggccatgattttacttttg
acatgcggacgtccaaaacaaaagagaggtaatgcagattctttagaagggaataaaatg
taccaggaagtgttacagacatggtttgcagaggatggctcaactattcccaaagctttc
ttgatggatacccaagaggaagcccttctacttccagactggttgagacttcgtttatta
cactgcgaagttaatgcgacagatgctagacttccaattgctggatcccgagatttggac
ctcgaacagttgttgctctttattcaatcttttggtattccatatcaatcaatggacaga
ctattaggtagcctcgatgagttttgttcatcaacacctgaagctgttgctaattcagta
aaagacaatagatcttatcttgctaaacttgtggagggccagtggaaaaggggatgctgc
aatggtactgattttcacgctttattgtcaatggaaaaattatcacctcgtccttcagta
attcaatcagcatctgccacgataacggatgtggtagatttgacggttgatcaaagtgag
gattctgatattatcatggtttcatctccagaaaaagcaacatctagtcaagaagaggat
gaaaatctatctatgctagtggatgacagtgtaactaacatgttgcaagatttatttatg
gccaatggtaatgatgtcatcaagtataaaatgaaaaagaacttgatattcaggaattta
atgaggtctatcaatttgcgaaaaatgaaaaattctaatggtgtagttaattgtgtttcc
gaaatgtatgcccttgtttctgctaagaaaacgggattggtgtttttgaacggtttgtac
atgaatactaactggagctgcagccttatcagaaaaattgattcctctttgaaaagagca
aaatcatgtagcaatttatctcagagaaaaataatagattccagtatagaagtttttgaa
aaacttgtgttgatacttaaagtgaaagcaccaagctcattgtcatctgaaaatcattta
ttactattactacagtcctgggcatgttcagaaaagaaacagcaagctgaaagcgaaggt
ttaggtcagcttgactgggcaagacttgaagaattcttacgaaagcagttggcattcctt
gaaagagatgaagaaataaaaaacaaagtagcacttgtggcaaaaatactcttagaagaa
attgggaatagaaaatcaaaagctagcaggggaaaatgcgatgttcaagatgatgcattt
tatgcaagtattgggacaactggacttttaatagattggcttcagttacttgaccctgag
cttcttgcccaccggccaaaactgcagcgaaaattactttttgagtcacagcgcttggtt
actttatccatgcctatcaagatgtcagcaaaaatgagtaatataaaacttccacagtca
ttgacttctcatcaaacatatcttctttcacttctggctgaacacagtaattgggagact
gtttacaaatgtctgcaatggctgctttcagattccacttatgaaacaagcacagaaaaa
tctggaaagagtcagtcttctggaatcaatgttgatgctcgcacagcaatggatttcctc
tgggtttgtatgcatatgtctaatatttggaaaggtcgtgaaaacaagagcactagtttg
caggaacctgttttctacttaaattctgaacaattttgcagagttttaagttacatggtt
gcatcaagcaccaaacaagccagttctactttgaaaagtggttggggaggtacttcttat
tttgagttattcctggttttctataccaggtttggtcaaaaggtaatgagatctgagaat
cttgaaaagactgttatgtttgtttactcaaaagctaaagaaaatgcagtagacttgtgg
tggcagcttctagctcagctctatattttacaaccatttcatgatgtttggaatacaacc
aattcacagtgtaatgaaggtattgaacaaaactacactcttgccaaagcagttacatct
tcagaggttggatccatttgtcgtctggattcacttgtacaaatgttacttgatagaatt
ggttatgtgaaagaaactggacgtgtcgatgctcgagactccgttacagctattcagtca
agtgttgatagcgcatatgatgcaagcctaattctcaaaaagcttgccagttgttgccca
gctattgttttacgacaactttctttaatgttgattacactttctggacgtacttggtat
gaatttcgagaatttaaggccaaaaatcacctgttgttcatgtctcaacttcttggaatc
ttggattcaataggtcatcagttgtttgataatgattatgcaaatgatgttgacaaaatt
attgacacttacctccagatgtgttcaaattattgtaccaaagcgagaaggcaacttcgt
gatgtcatgcacaacactctgcaaattgtttatctatttttacaaaagaaaccgcagcga
gctcatcggattgtttaccaatacatgtatatgctccaaggactgatggaccatacatat
agtgatcatgactatgttgtttctttgataaggaaaataatgaacactgttgaatcagct
ccactaatgatgaatacatacaatgctgaaacagaggaacctgttaacgatgacatctta
atcatagatactgaaataagcgatgcaaatgaacaagccacaccatatctgagaattttg
gccaaaagtgatgatttggaaaatattgcacaggttttggcagagttatctgacacaaag
cgaaaaataacaaatttggagccttttttaccacacttcaccaagttatttacaacttgc
agagagagtagtattagacacgcagccctaagtgcatccattgtttgtatgcgggcctcc
ccttctcgaagttgcccacaaatattaccagcgtatctatcctgcctaactggtataaaa
acaccgcttgtttcaacttccagtcaaacaagactttatgaattgggtgaaaccactgca
gtaactgggaccaattcagatgaacttgcacaaacagctttagatttcttacctgatgtt
gttgttttgtgtagagaaagagcagcaaagattttggaagcagctttcgcttgtggttcc
agagggggagtaggcattcagccacctggacctcagggattgcttggaacaccagtagct
atcggaggaaaatcaacatggcaggatttgagtgaacttcttgccaagtcagtaaccttg
ttaagtggtctcgcacagtcaaatgtgaaacctgcaccatcaggacagagttga
DBGET
integrated database retrieval system
