Styela clava (leathery sea squirt): 120348531
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Entry
120348531 CDS
T07291
Name
(RefSeq) actin, cytoplasmic-like isoform X1
KO
K05692
actin beta/gamma 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03082
ATP-dependent chromatin remodeling
sclv04145
Phagosome
sclv04814
Motor proteins
sclv04820
Cytoskeleton in muscle cells
sclv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120348531
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120348531
09142 Cell motility
04814 Motor proteins
120348531
04820 Cytoskeleton in muscle cells
120348531
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120348531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120348531
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120348531
03036 Chromosome and associated proteins [BR:
sclv03036
]
120348531
03029 Mitochondrial biogenesis [BR:
sclv03029
]
120348531
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sclv04812
]
120348531
04147 Exosome [BR:
sclv04147
]
120348531
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120348531
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
120348531
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
120348531
NuA4 complex
120348531
Chromatin remodeling factors
BAF complex
120348531
PBAF complex
120348531
GBAF(ncBAF) complex
120348531
SWR1 complex
120348531
Mitochondrial biogenesis [BR:
sclv03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
120348531
Cytoskeleton proteins [BR:
sclv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120348531
Exosome [BR:
sclv04147
]
Exosomal proteins
Proteins found in most exosomes
120348531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
120348531
NCBI-ProteinID:
XP_039274617
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAIIRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEAEMGTAATSSSLEKS
YELPDGQVITVGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDVDIRKDLYANTVL
SGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPAIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgatgatgttgctgctcttgttgtcgataatggttccggaatgtgcaaagcc
ggatttgccggggatgacgccccacgtgcagtgttcccatctattgttggaaggccaagg
catcagggtgtcatggtaggaatgggacagaaagattcctatgtcggagatgaagcccaa
agcaaaagaggaattttgactcttaaatatccaatcgaacacggaatcgtcacaaactgg
gatgatatggagaaaatctggcatcacacattctacaatgaattgagagttgctccagaa
gaacatcccgtacttctcactgaggccccactcaaccccaaggccaacagagagaagatg
actcaaatcatgttcgaaactttcaacactccagcaatgtacgttgcaatccaggccgta
ctttctctctacgcatctggacgtactaccggtatcgtcttcgacagcggtgatggtgtt
tcccacactgtccctatctacgaaggttacgcactccctcacgccatcattcgtttggat
ttggctggacgtgacttgactgattacttgatgaagattcttaccgagagaggatactct
ttcaccacaactgccgaacgtgaaatcgttcgtgacatcaaagagaaactctgctacgtc
gctctagacttcgaagcagaaatgggtacagcagccaccagtagctcgttggaaaagtct
tacgaacttcctgacggacaggtcatcaccgtcggaaacgaacgattccgttgtcccgaa
accttgttccaaccatcattcattggaatggaatctgctggaattcatgaaaccgcatac
aattcaatcatgaaatgtgacgtcgatatccgtaaagatttgtacgccaacactgtcttg
tctggaggttctactatgttccccggaattgccgatcgtatgcagaaggagatcagcgca
cttgctccaccgacaatgaagatcaaaatcatcgccccacctgagcgtaaatattccgtc
tggatcggaggctccattctcgcctctctttccactttccaacaaatgtggatctccaaa
caggaatacgatgaatccggccccgcaatcgtccatagaaaatgcttctaa
DBGET
integrated database retrieval system
